Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0060 ATGTATAAACCATTTGTGACATGTGATGATCCAAAAGGAGTTGTTGAGTGTGGAAGTATAAGAAGGTATAAGTCAAATTCTCATAAAATGAAGGACAAGACAAAGAGTCGAAAGACGGCCGAAAATTTAGAGACAAACAAACAAGACAAAGAAGAGAAAGTGTCATCAAAAGTTTCGAGCGAAAGAGGTTTTGATCCATCTTCTTTGCAGCTTGTGAAGGTGTCTAGAGGTGCCGAGAAGTTGAACAACATGATTGAGTCATGGTCTAGAGGTTTGAAGTACGGTGCAAAATCCGAAGATATTGCGAAGGATTTGTTAAAAGGGGCTCTTGATTTGCAAGAATCTCTTGAGATGCTTCAAAAGGTGCAAGAAGTTTCGAATAATATGGCTCGATCGAAGAAGAAACAAGATGAGGAACGTGAAAGAAGTAGAATTGATGCAAAGGTGAATGATGGAATTAGAACAATGCATTCCAATCATTTTGTTGAACACAATTCTGCTTATGGTTCTTCGAGTAGTTGTAGAGAGGAACTTAAGAAAGTGATTAAGGAGAGTTTGGTTAGACAGAATCTATTCCAAAGCACAAGCACTTCTGAAGGATTAGATTCAGCTTCAGCAGCATTTCCTTCTACAAGCTCAAGTCAATCTTCTGTTGTTTGGTATGACAAACTTTCCGATTCTTCATCGTCACCGAATTTTCCAAGGAAGGAAAAAAGTACCAATCTTGTTGCAAAGTTGATGGGATTAGAACAAGTCCCCTCAAGAACATTTCCATCTGTTATGCAAAAACAGTTGGAGAATCAAAAGATTGTGAATCAAAAGAGACCTGTATTCGAGATTGACACGCCGAAGGCAAGAAAGAATAGTTCATTTATTGAGAGGGCTAATATCGAGAAACAAAAGACTCTGAGGGAAATTCTTGAAACTACTCATTACAATGGATTTTTGAAGAATAGTCCTATTAGAGAGCACAAGCTTCATAATCATGTTCATCATTCGGATGATCTTGATCACCAAAAGTTTGATGATTTACCACCGATTGTGCTCATGAAACCTCGGCGCGCTACATATCAAGAATTTGTAGAAACTTATGAGCCAGTTCGTCCGGAAGAGTTCTCGTTTAGAAATCTAAAAGAGAAAACAGTCTCTTCAAAAACCTTCAAGCCAAGGGAAGGTTCGGATACAAATATGAGAAAAGACGTGGAAGAAAATCTATCCAAAAGGATTATCAAAGAAGAAAGACCGAAGCGCGTCAAAGAGGTTGTGGAATTTGATGTGAAAGAAATCAAACCGGTCGAAAACAAGAAGGTGGTTCAAAAAGCTAGTCGCAGATTACAGGCAAGTGAAAAAGTCGATGAAAAAGTTAAGGTAAAGACTATTAATATTAGCAGAAAGCCGGTAGAGAAGGATGTTTCAAAAGCTAAAGCTATAACGAAAGCTCAAGATCAAGGAGAAATCAGGTCTAGTAGTGAAAAGTTGAGGAAGCCGAGAAGTGTGTCGAGGATTGAGAAGAATGAGATTCCATACAAAAAAGGCACTGCTTCTTCAAATTCAAATATCATCACAAAACCAAAGACACCAAAAGTTAATAACTCAAAGGAATTGAGAAAAAGTCCGATGAAGAAGCAAAGGTCTGTTGATGAGGCTGAAGCAGCTAAACCACTTGATGAGCAATTAAGGGAAGAAGAGGGAATGAGTATGAATGTTTCTTGTAAAGATGAGTGTACCGAGATTAAAATAATCACTACAATAACAGAAGATCTCATCATGGATCATGAAGAAGTAGACACCTATGCAAATAAGACTAATGATAATTGCGAGGTGGACCGTCATAATTCTTCAAGTGATGATGTTTTGATGATAAATTGTGAACATGAAAATGATACCATCTCAGCCGAGGAAGCTCTTGACACCGCCAGCATCAATGAAACTGGTTTCAAGCAAGACAAAGACATTGATGACACCACGAGTATCAGTGAAACCGATTTCCAACCTGATAAAGACACTTCTGAGCTGAAATATTTGCTTCTAACAAGTAAATCATTTATTGACCATGCAGATGAGCTTCTCAATCTTGATGTTGATTATCCTAATATCATACCAAAGATTGAAACTAACGGAATAGCCAATACAAAACTCTATTTGGATTGTGCAAATGAACTCGCCGAGCGAAAAAGTCTTCGAGACTCATCACAAGTAGTTCACCCTTTATTGCTAACTTATGTTGGGAATTCAAGATTGCAAATATCTTTGAGCAGCTTGGTTGAAGAAGTGAACAATGCAATTGAGAATTTGACATCTTATAGTGAAAATTCTGAGACTAAACTTATTTTGGACAATGTTTGTGCAATGTTGGAGAGAGATATGAATTGCAACAATAGATTGATGAATGGAATATGGAACTGTGGTTGGAAGCATGGATTTTCTTCTGATGAAGTTGAGCAAGTTGTTCATGAAGTAGAAAACATGGTTTTAGGTGGATTAATTGAGGAGATTATTGTAAATTTATGA 2511 0.3724 MYKPFVTCDDPKGVVECGSIRRYKSNSHKMKDKTKSRKTAENLETNKQDKEEKVSSKVSSERGFDPSSLQLVKVSRGAEKLNNMIESWSRGLKYGAKSEDIAKDLLKGALDLQESLEMLQKVQEVSNNMARSKKKQDEERERSRIDAKVNDGIRTMHSNHFVEHNSAYGSSSSCREELKKVIKESLVRQNLFQSTSTSEGLDSASAAFPSTSSSQSSVVWYDKLSDSSSSPNFPRKEKSTNLVAKLMGLEQVPSRTFPSVMQKQLENQKIVNQKRPVFEIDTPKARKNSSFIERANIEKQKTLREILETTHYNGFLKNSPIREHKLHNHVHHSDDLDHQKFDDLPPIVLMKPRRATYQEFVETYEPVRPEEFSFRNLKEKTVSSKTFKPREGSDTNMRKDVEENLSKRIIKEERPKRVKEVVEFDVKEIKPVENKKVVQKASRRLQASEKVDEKVKVKTINISRKPVEKDVSKAKAITKAQDQGEIRSSSEKLRKPRSVSRIEKNEIPYKKGTASSNSNIITKPKTPKVNNSKELRKSPMKKQRSVDEAEAAKPLDEQLREEEGMSMNVSCKDECTEIKIITTITEDLIMDHEEVDTYANKTNDNCEVDRHNSSSDDVLMINCEHENDTISAEEALDTASINETGFKQDKDIDDTTSISETDFQPDKDTSELKYLLLTSKSFIDHADELLNLDVDYPNIIPKIETNGIANTKLYLDCANELAERKSLRDSSQVVHPLLLTYVGNSRLQISLSSLVEEVNNAIENLTSYSENSETKLILDNVCAMLERDMNCNNRLMNGIWNCGWKHGFSSDEVEQVVHEVENMVLGGLIEEIIVNL* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0060 836 PANTHER OS01G0228800 PROTEIN-RELATED 1 834 - -
Tpr5g0060 836 MobiDBLite consensus disorder prediction 529 554 - -
Tpr5g0060 836 Coils Coil 33 53 - -
Tpr5g0060 836 MobiDBLite consensus disorder prediction 485 508 - -
Tpr5g0060 836 MobiDBLite consensus disorder prediction 128 144 - -
Tpr5g0060 836 PANTHER OS01G0228800 PROTEIN 1 834 - -
Tpr5g0060 836 Coils Coil 122 142 - -
Tpr5g0060 836 MobiDBLite consensus disorder prediction 34 59 - -
Tpr5g0060 836 MobiDBLite consensus disorder prediction 20 67 - -
Tpr5g0060 836 Coils Coil 751 771 - -
Tpr5g0060 836 MobiDBLite consensus disorder prediction 473 554 - -
Tpr5g0060 836 MobiDBLite consensus disorder prediction 124 144 - -
Tpr5g0060 836 MobiDBLite consensus disorder prediction 510 528 - -
Tpr5g0060 836 Pfam Domain of unknown function (DUF4378) 709 831 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0060 Tpr-Chr5 941681 947341 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0060 626 833 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 27.074 8.49e-17 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0060 - - gmx:102663636 901.738