Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0053 ATGGCCACCACCACCACCACCACCACCATCTTCTCCATCTTCCTTCTCTTCATTGCCCTTTTCAAAACCCTAACCCTAAATCCCTCAATTTCCTCACAACCACCACAATCTCCACCTCCAAATTACATCATCGGATTCACCCAATACAAAACCGCTGACCACCACCGTGCTTATCTTGAATCCAATCTCCGATCAAAAGGGTGGCAATGGATTGTAAGAAATAATCCTGCAGCTAAATTCCCCACCGATTTTGGCCTTGTTTCGGTTCATGAATTGGGGATTATTGAAGAAATTAAGAAATTAGGGTTAGTGAAGTATGTTAGTTTGGATATGAGTTATAAAAGGGGTTTGATGAAACATGGTAGTGATAAAGTTGGTTCTTTTATTGATGGGAATAAAAAACCTGGGAAGATCTTTACTAAGATGTCGTTTTGTGAAGCAGAAGAAGAACAAGAACAAGATACTGTCAATCACAATCACAATCACAATCACAATCACAATAATTCCATCAAATGGGGGAGACAATTGTTGTTCCAGAGATCACAAGTTACTTCTATGTTTGGGGCGGAAGAACTGTGGACGAAAGGGCACACTGGTGCAAAGGTCAAGATGGCCATATTTGATACTGGCATTCGTGCTGATCACCCCCATTTCCGTAACATCAAGGAGCGTACAAATTGGACTAACGAGGATACATTGAATGACAATCTTGGACATGGGACTTTCGTTGCTGGTGTTGTTGCCGGTATGGATGCTGAGTGCCTTGGTTTTGCACCAGATACAGAGATTTATGCATTTCGTGTGTTCACTGATGCACAGGTGTCATATACCTCTTGGTTCCTTGATGCCTTTAACTATGCAATTGCAACAAATATGGATGTGCTCAATTTGAGCATAGGTGGACCTGATTACTTGGATCTCCCATTTGTAGAAAAGATATGGGAGATAACAGCCAATAACATAATAATGGTTTCTGCAATTGGAAACGATGGACCACTTTATGGAACTTTGAATAATCCAGCAGATCAAAGTGATGTGATTGGTGTTGGTGGTATTGACTATAGTGACCATATAGCTTCCTTTTCCTCACGTGGAATGAGTACCTGGGAACTTCCTCATGGTTATGGCCGTGTGAAGCCAGACGTAGTTGCATATGGACGAGACATAATGGGATCAAAGATTAGTTCGGGTTGTAAAAGTTTATCAGGGACCAGTGTTGCAAGTCCTGTAGTGGCTGGTGTTGTATGTTTGCTTGTCAGTGTCATTCCTGAACCTGACCGCAAAAATCTCTTAAACCCAGCAAGCATGAAACAAGCATTGGTCGAGGGTGCTGCAAAACTTGCTGGGCCTAACATGTACGAGCAGGGTGCTGGCAGAGTTGATCTGTTAGAATCATATGAGATTCTTAAGAGCTACAAACCGAGGGCAAGCATCTTTCCCAGTCTTCTTGATTACTCGGATTGTCCTTATGCATGGCCCTTTTGTCGTCAGCCACTCTATGCAGGTGCCATGCCTGTCATCTTCAATGCCAGCATTCTAAATGGAATGGGTGTTATTGGCTACGTCGAAAGTCCGCCAATATGGCATCCTTTTGAAGAAGTAGGGAATCTTCTAAGCATTCATTTTACATATTCTGAGATCATCTGGCCTTGGACTGGTTATTTGGCCATTCATTTGCAAATCAAGGAAGAAGGTGCACAATTTTCCGGTAACATTGAAGGTAATGTGACTCTTAGGGTTTCCAGCCCTCCAGCTCAAGGAGAAAAGCGCCCTCGAGTTAGCACATGTGTGCTTCAATTGAAGTTAAAAGTGGTGCCAACACCGCCACGAGCAAAACGAATTTTGTGGGATCAGTTTCACAATATCAAATACCCCCCAGGTTATATCCCCAGAGATTCGTTGGATGTTCGTAATGACATTCTTGACTGGCACGGGGATCATCTACATACAAATTTTCACATAATGTTCAACATGTTACGAGACACTGGTTACTATGTTGAAACACTTGGTTCTCCTCTTACCTGCTTTGATGCTCGACACTATGGAACACTTCTTTTGGTCGATCTTGAAGAAGAGTACTTTCCCGAGGAGATTGAAAAGTTGAGAGACGATGTTATAAATACTGGATTGGGATTAGCTGTCTTTGCTGAGTGGTACAATGTAGATACCATGGTAAAGATGAGATTCTTTGATGATAATACCCGGAGTTGGTGGACCCCTGTCACAGGAGGTGCTAATAATCCTGCTCTTAATGATCTTTTGGCTCCATTTGGAATTGCTTTTGGAGATAAGATTCTGAGCGGTGATTTTTCACTTTTCGGTGAGGAAAATCGATATGCATCTGGAACAGATATAGTGAGGTTTCCAAGAGGTGGTTATGTACATAGCTTTGCTTTTTCAGATAGTTCAGAAAGTGGAGCCACTCAGAATGTGTTGCTTACTTCTAGCACCACCAAGGCAGATTCTCCAATTCTTGGTCTTACGGTGATGGGTGAAGGTCGCATTGCTGTGTATGGTGACTCCAACTGTTTGGACAGCAGCCATATGGTCACTAACTGTTTTACACTTCTGAGGAAAATGCTAGATTTTACTAGTGAGAATGTTAGAGATCCAGTGCTTTTCTCTAAATCAAATAAACAAGTCGCTCCCTTATATGAAGACGACAATCAGTTACCATCTCGCAGAACTGATGTAAATTTCTCTTCATATTCAGCTGTTGTGGGGAAGGACTTGATATGCAGGACCGACTCAAGGTTTGAAATATGGGGAACTAAGGGCTACATTTTGCAAGTCAGAGGAAGAAACAGAAGATTGCCTGGTTATCCTGTCATTGATCTCGGGAATGGTTTAAATTCAACCTTTGATGCTTCTAACATTAGGCGTCGAAAGGTAACTTTGAGAAATAAGGACGACTCTCTTGGGAATAGATATTTAGGCCTGTTCTATGGAGATGAGCCTGATGCACCTATGTTGGTTGGTAGTCACTGGCTTATTCCTGCTGTTGTTGCAGCAACTGGTATTTTACTATTGAGTTTTTGGCGCATTCGCCAAAAGAGACGTCGAAGAAGGAAAGGATCGTCAAGCTCTGGTAGACTGACCAATTTATAG 3108 0.4231 MATTTTTTTIFSIFLLFIALFKTLTLNPSISSQPPQSPPPNYIIGFTQYKTADHHRAYLESNLRSKGWQWIVRNNPAAKFPTDFGLVSVHELGIIEEIKKLGLVKYVSLDMSYKRGLMKHGSDKVGSFIDGNKKPGKIFTKMSFCEAEEEQEQDTVNHNHNHNHNHNNSIKWGRQLLFQRSQVTSMFGAEELWTKGHTGAKVKMAIFDTGIRADHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVVAGMDAECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNMDVLNLSIGGPDYLDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYSDHIASFSSRGMSTWELPHGYGRVKPDVVAYGRDIMGSKISSGCKSLSGTSVASPVVAGVVCLLVSVIPEPDRKNLLNPASMKQALVEGAAKLAGPNMYEQGAGRVDLLESYEILKSYKPRASIFPSLLDYSDCPYAWPFCRQPLYAGAMPVIFNASILNGMGVIGYVESPPIWHPFEEVGNLLSIHFTYSEIIWPWTGYLAIHLQIKEEGAQFSGNIEGNVTLRVSSPPAQGEKRPRVSTCVLQLKLKVVPTPPRAKRILWDQFHNIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDTGYYVETLGSPLTCFDARHYGTLLLVDLEEEYFPEEIEKLRDDVINTGLGLAVFAEWYNVDTMVKMRFFDDNTRSWWTPVTGGANNPALNDLLAPFGIAFGDKILSGDFSLFGEENRYASGTDIVRFPRGGYVHSFAFSDSSESGATQNVLLTSSTTKADSPILGLTVMGEGRIAVYGDSNCLDSSHMVTNCFTLLRKMLDFTSENVRDPVLFSKSNKQVAPLYEDDNQLPSRRTDVNFSSYSAVVGKDLICRTDSRFEIWGTKGYILQVRGRNRRLPGYPVIDLGNGLNSTFDASNIRRRKVTLRNKDDSLGNRYLGLFYGDEPDAPMLVGSHWLIPAVVAATGILLLSFWRIRQKRRRRRKGSSSSGRLTNL* 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0053 1035 CDD Peptidases_S8_SKI-1_like 193 449 IPR034185 -
Tpr5g0053 1035 ProSitePatterns Serine proteases, subtilase family, serine active site. 403 413 IPR023828 -
Tpr5g0053 1035 ProSitePatterns Serine proteases, subtilase family, histidine active site. 239 249 IPR022398 -
Tpr5g0053 1035 PANTHER PEPTIDASE S8 40 866 - -
Tpr5g0053 1035 PANTHER MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE-1 PROTEASE 40 866 - -
Tpr5g0053 1035 ProSiteProfiles Serine proteases, subtilase domain profile. 171 469 - -
Tpr5g0053 1035 Gene3D Peptidase S8/S53 domain 170 465 IPR036852 GO:0004252|GO:0006508
Tpr5g0053 1035 PRINTS Subtilisin serine protease family (S8) signature 199 218 IPR015500 -
Tpr5g0053 1035 PRINTS Subtilisin serine protease family (S8) signature 235 248 IPR015500 -
Tpr5g0053 1035 PRINTS Subtilisin serine protease family (S8) signature 402 418 IPR015500 -
Tpr5g0053 1035 Pfam Subtilase family 200 450 IPR000209 GO:0006508|GO:0008236
Tpr5g0053 1035 SUPERFAMILY Subtilisin-like 178 462 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0053 Tpr-Chr5 859174 865482 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0053 273 1013 Subtilisin-like Serine Gene Family AT5G19660 79.412 0.0 1239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0053 K08653 - gmx:100819188 1786.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0053 5 859174 865482 Tpr5g0053 5 859174 865482 ECH