Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr5g0040 | ATGGGGATGGAGCAAAACAACGTGATCGCACCGTTCATTATGAAGACATATCACATGGTTAACGAACCAAACACAGATAACCTTATCAAGTGGGGTCCATCAAACAACAGTTTCATCGTCCTTGATCCACTCCAATTCTCTCACTCTCTTCTTCCTGTTTTCTTCAAACACAACAATTTCTCTAGCTTTGTTCGTCAACTCAACACCTACGGTTTTAGAAAAGTGGATCCGGATAGATGGGAATTTGCGAATGAGTATTTTCTAAGAGGACAAAAACAATTATTGAAGAACATAGTTAGGAAGAAGCACGTTGGTGGAGTTGGAAATGGAAGGAACAATAATAATTATTTTAATGAGGTGAAATTTGAAGATTTAGAAGAAGATGAAGTTATGATGAAGGAAATATTGAAGCTAAAAGAAGAACAAAGAATTTTAGATGAAGAGCTTCAAGGAATGAACAAAAGATTAGAAACAACAGAGAAAAGACCACAACAAATGATGGCTTTTCTTTGCAATGTCGTTGAAGATCCTCAAATTCTATCAAGAATACTAAATGAGAGAGAAAAACAAATAATTGTTGAGACGAAAAAACGACGGTTTATATCTCCGCCGGAGACGGCGGCGATGACGGTGGCGACCACGTCAACTTCTTCGTCATCTTCCGGCATGGGGATAGCGAGTACCGTGAAGATGGAGTTTGATGAAGACGAGGTGACTGTTGCGAATAATATGACGTCGTCTTCGCCGGAGATGGGTTTTGAAATTGATTATTTCCACCGTGAGCCGCCGCAGGGGTTGACGCCGGCGGGTGATTGGTGGGGGCAGACACAGTTTGGACAAATGGGTTTTAGGAATGATTGTGCAGTTGTTCCGACACCGTTGACGGTGGTGTCTCCGGCGCCGGTGATGGGAGGTGGGAATAGCAATAGTAGAACGGAGTGTGTGGTTTTCAATGAAATGGCGGCGGAGAATAGTAAGTTGCCACCTTATCCTTTTTCATTGTTAGAAGGTGGCTTTTAG | 1020 | 0.4225 | MGMEQNNVIAPFIMKTYHMVNEPNTDNLIKWGPSNNSFIVLDPLQFSHSLLPVFFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEYFLRGQKQLLKNIVRKKHVGGVGNGRNNNNYFNEVKFEDLEEDEVMMKEILKLKEEQRILDEELQGMNKRLETTEKRPQQMMAFLCNVVEDPQILSRILNEREKQIIVETKKRRFISPPETAAMTVATTSTSSSSSGMGIASTVKMEFDEDEVTVANNMTSSSPEMGFEIDYFHREPPQGLTPAGDWWGQTQFGQMGFRNDCAVVPTPLTVVSPAPVMGGGNSNSRTECVVFNEMAAENSKLPPYPFSLLEGGF* | 340 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr5g0040 | 339 | PRINTS | Heat shock factor (HSF) domain signature | 12 | 35 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr5g0040 | 339 | PRINTS | Heat shock factor (HSF) domain signature | 50 | 62 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr5g0040 | 339 | PRINTS | Heat shock factor (HSF) domain signature | 63 | 75 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr5g0040 | 339 | PANTHER | HEAT STRESS TRANSCRIPTION FACTOR C-1 | 10 | 333 | - | - | |
Tpr5g0040 | 339 | Gene3D | - | 4 | 102 | IPR036388 | - | |
Tpr5g0040 | 339 | SUPERFAMILY | "Winged helix" DNA-binding domain | 9 | 101 | IPR036390 | - | |
Tpr5g0040 | 339 | Coils | Coil | 135 | 162 | - | - | |
Tpr5g0040 | 339 | ProSitePatterns | HSF-type DNA-binding domain signature. | 51 | 75 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr5g0040 | 339 | Pfam | HSF-type DNA-binding | 12 | 101 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr5g0040 | 339 | PANTHER | HEAT SHOCK TRANSCRIPTION FACTOR | 10 | 333 | IPR027725 | - | |
Tpr5g0040 | 339 | SMART | hsfneu3 | 8 | 101 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr5g0040 | Tpr-Chr5 | 643543 | 645292 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr5g0040 | 8 | 199 | HSF | AT3G24520 | 61.735 | 1.93e-79 | 244 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HSF | Tpr5g0040 | HSF_DNA-bind | 1.7e-30 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr5g0040 | K09419 | - | gmx:100794896 | 363.229 |