Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0038 ATGCCGCGATCAAGTTCTGGAATTCATCACCAGCGTCAGAACTCTGATAATTTCATCCTTGATGCAAATTATCATGGAAGATGGTTTCAACCTTCAGCTTTTGCTCAGGAATTTGGAACTCGATCATCGAGCTTGAGGAAGAATGATGATGATCGTTTGTTCACTAGTGGCTTGCTTGACTTGCATTCGTTTGATACTGAGCTTTTACCTGAGGGGCAATATTTTGATGACTCTGAGCCGATTTTCCCCGGGAACAAACTCGCGCCTAGGTCTCGGGGCTTGGCTGAGAGCAACATTCTTAAAAGTTTTGCAGCAGATAAAGAGAGAGCAAACAATGTTGCTAAGATCAAAGTTGCGGTTAGGAAGAGACCACTAAATAAGAAGGAAATAGCAAAGAAAGAGGAAGATATTATTACCATAGACTCAAACTCTCTCACAGTTCACGAAAGAAAACTCAAGGTTGACTTGACAGAATACGTCGAGAAACATGAGTTCTTTTTTGATGCCGTGCTGGATGAAGATGTTTCAAATGGTGAAGTGTATGCTGAGACCGTGGAGCCCATAGTTCCATTGATATTCCAACGAACAAAAGCAACTTGCTTTGCATATGGGCAAACCGGGAGTGGAAAGACTTATACTATGCAGCCATTGCCTCTCAAAGCATCCCAAGATATTTTAAGATTAATGCACTACACATACCAGAACCAAGGTTTCCAATTATACATTAGTTTTTTCGAAATATATGGGGGGAAACTGTTTGATCTTCTCAATGATAGAAAAAAACTTTTGATGAGGGAGGATGGTAGACAGCAAGTTTGCATTGTTGGCTTGCAAGAATACAGAGTTTTTGAAGTTGAAACAATCAAGCAATTTATTGAGAAAGGAAATGCTACAAGAAGTACTGGTACAACCGGTGCAAATGAGGAATCGTCTCGATCACATGCTATACTTCAACTTGTTATCAAGAGATCAGCTGATGGGTCTGAATCAAAGCCTGCTCGAGTTATAGGCAAACTTTCTTTCATAGATCTGGCTGGAAGTGAACGTGGTGCAGATACTACTGATAACGATAAGCAGACTAGGATTGAAGGTGCTGAAATTAATAAAAGCTTACTTGCATTAAAAGAATGCATTAGAGCTCTAGACAATGACCAAGGGCATATCCCTTTCAGAGGAAGTAAATTGACTGAAGTTCTGCGTGACTCTTTTGTTGGTAATTCGCGGACTGTAATGATATCTTGCATTTCGCCAAGCTCGGGTTCATGTGAGCATACTCTCAACACATTAAGATATGCTGACAGGGTAAAGAGCCTGTCAAAGGGTAATAGCTCCAGAAGGGATCCCCTTTCTTCATCTAACCTTAGAGACTCAACTGTGTTGCCGGTTATACCTCATGATAATACTTTTGAGGATGAAACAACATATGTTTCCAGTGAGAGGAATCAATTCGGATGGTCCAAACAGCCTGAAAGAGAACCCTCGCCTTCAAATAATGTGGACCGTGTTGAAAGTGGTAGGTTCGAGGGAAATTTGGCACCATCTGTGTACTCTGACCAACAAAGGGGTCAAAGAGGCGTTCAAAATGGTAGAGCTGAAAAGGAAAATGATTACCTAGCACCAACATATGGACAAGACAGAACAAGAAAAACGAGCAAGAGGGTGGATAACAACCAGTTATCTACCGTAGAAGACAAAAGGAAGATAGGCTCTCGTGCTAAACATGTTGAGAATACATCTTCTGATCCCGATGATGATTTTAATGCTCTGTTGAAGGATGAGGAAGATCTTGTAACTGCTCACCGTAGACAAGTGGAGGAAACAGTAGATATTGTTAGGGAGGAGATGAATTTACTCTTTCAAGCTGACCAACCAGGAAATCAATTGGATGATTATATTTCCAAATTGGATACCATTTTGTCTCAAAAGGCTGCAGGAATATATCAATTGCAAGCACAGTTGGCTCAATTCCAGAGACGTTTAAATGAGTACAACATTTTCTCATCTTCTGGTGACTGA 2016 0.4077 MPRSSSGIHHQRQNSDNFILDANYHGRWFQPSAFAQEFGTRSSSLRKNDDDRLFTSGLLDLHSFDTELLPEGQYFDDSEPIFPGNKLAPRSRGLAESNILKSFAADKERANNVAKIKVAVRKRPLNKKEIAKKEEDIITIDSNSLTVHERKLKVDLTEYVEKHEFFFDAVLDEDVSNGEVYAETVEPIVPLIFQRTKATCFAYGQTGSGKTYTMQPLPLKASQDILRLMHYTYQNQGFQLYISFFEIYGGKLFDLLNDRKKLLMREDGRQQVCIVGLQEYRVFEVETIKQFIEKGNATRSTGTTGANEESSRSHAILQLVIKRSADGSESKPARVIGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNSSRRDPLSSSNLRDSTVLPVIPHDNTFEDETTYVSSERNQFGWSKQPEREPSPSNNVDRVESGRFEGNLAPSVYSDQQRGQRGVQNGRAEKENDYLAPTYGQDRTRKTSKRVDNNQLSTVEDKRKIGSRAKHVENTSSDPDDDFNALLKDEEDLVTAHRRQVEETVDIVREEMNLLFQADQPGNQLDDYISKLDTILSQKAAGIYQLQAQLAQFQRRLNEYNIFSSSGD* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0038 671 MobiDBLite consensus disorder prediction 442 458 - -
Tpr5g0038 671 PANTHER KINESIN-RELATED PROTEIN 6 40 669 - -
Tpr5g0038 671 MobiDBLite consensus disorder prediction 470 503 - -
Tpr5g0038 671 Pfam Kinesin motor domain 121 437 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr5g0038 671 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 438 IPR027417 -
Tpr5g0038 671 ProSiteProfiles Kinesin motor domain profile. 115 438 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr5g0038 671 ProSitePatterns Kinesin motor domain signature. 337 348 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tpr5g0038 671 SMART kinesin_4 113 444 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr5g0038 671 PANTHER KINESIN-LIKE PROTEIN 40 669 - -
Tpr5g0038 671 PRINTS Kinesin heavy chain signature 195 216 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr5g0038 671 PRINTS Kinesin heavy chain signature 304 321 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr5g0038 671 PRINTS Kinesin heavy chain signature 338 356 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr5g0038 671 PRINTS Kinesin heavy chain signature 388 409 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr5g0038 671 MobiDBLite consensus disorder prediction 546 581 - -
Tpr5g0038 671 Gene3D Kinesin motor domain 95 441 IPR036961 -
Tpr5g0038 671 CDD KISc_KIF2_like 115 436 - -
Tpr5g0038 671 MobiDBLite consensus disorder prediction 437 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0038 Tpr-Chr5 600446 606529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0038 114 438 Calmodulin-binding Proteins AT5G65930 35.224 2.63e-43 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0038 K10393 - gmx:100775562 1098.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0038 5 600446 606529 Tpr5g0038 5 600446 606529 ECH