LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr5g0036	ATGTTCAAATTTCTCAAAGAAGTTGTTGGTGGATCTGGAACTGGTATCAAAGATCTTCCATATAACATCGGTGAACCTTATCCTTCTGCTTGGGGCTCTTGGCTTCATCATCGCGGTACATCCAAGGATGATGGTTCACCGGTTTCGATTTTTTCATTATCTGGAAGCAATGCTCAGGATGGACATTTAGCTGCTGGTCGTAATGGTGTCAAGCGTCTACGAACTGTTAGGCATCCAAATATTTTGTCGTTTCTTCATAGTACCGAGGTCGAAACTTTTGATGGCGGTTCTTCTAAGGTTACAATTTATATTGTGACTGAACCTGTAATGCCACTTTCAGATAAGATTAAGGAGTTAGGTCTTGATGGTACACAAAGGGATGAATATTATGCTTGGGGACTGCATCAGATAGCGAAAGCCGTGAGCTTCTTAAATAATGATTGTAAACTTGTTCATGGAAATGTTTGCTTGGCTAGTGTTGTTGTGACACAAACTTTGGACTGGAAACTCCATGCTTTTGATGTTCTGTCAGAGTTTGATGGGAGTAATGAGACATCCTCTACGCAAATGCTGCAATATGCATGGCTTGTTGCAACACAGTACAAATCAATGGAGCTGGCAAAATCCGACTGGGCTGCAATTAAGAAGTCTCCTCCATGGGCCATTGATTCTTGGGGCATGGGCTGTCTAATCTATGAGCTATTCTCTGGTTTGAAGTTGAGCAAAACAGAGGAGTTACGCAACACTGCCTCCATTCCCAAGTCTCTGCTTCCAGATTACCAGCGGCTACTCAGTTCCACGCCTTCTCGTAGATTAAATACATCAAAGCTTATAGAAAACAGTGAGTATTTTCAAAATAAGTTGGTAGACACAATACATTTCATGGAAATTCTTAGTTTGAAAGATAGCGTTGAGAAGGACACTTTCTTCCGCAAGCTTCCAAATTTAGCAGAGCAGCTTCCTCGTGAGATTGTGTTAAAGAAGTTACTTCCTTTATTAGCTTCTGCCCTTGAATTTGGTTCAGCTGCTGCCCCTGCTTTGACTGCATTGTTGAAAATGGGTTCCTGGCTTTCAGCTGAGGAGTTCCGTGCCAAGGTTCTTCCAACAATAATTAAACTCTTTGCCTCCAATGATCGAGCTGTCCGTGTCAGCCTTCTCCAACATATTGATCAATTCGGAGAGTCATTATCTGCTCAAGCTGTTGATGAACAGGTTTACCCTCATGTTGCTACTGGTTTCTCTGATACATCTGCTTTTTTGAGGGAGCTTACTCTCAAGTCTATGTTAATTCTGGCTCCGAAGCTGTCTCAAAGGACCTTGTCTGGGTCATTATTAAAGCATCTATCAAAGTTACAGGTCGATGAAGAGCCAGCAATACGAACAAATACAACTATCTTGCTAGGAAATATTGCAAGCTACTTAAACGAAGGGACAAGAAAAAGAGTGTTGATTAATGCATTTACAGTCCGTGCTTTACGTGATACCTTTCCACCTGCTAGAGGAGCAGGCATTATGGCTTTATGTGCCACCAGTTCCAACTATGACATCACTGAAATTGCCACTCGGATTCTTCCTAATGTTGTTGTACTCACAATTGATCCTGACAGTGATGTTCGATCCAAGGCATTTCAAGCTGTGGATCAATTTTTGCAGATGGCAAAGCAACATTATGAAAAGACAAATATAGCAGAGACTACTGGAGGTGCAGGAATGGAAGGTTCATCAATTCCAGGAAATGCAAGTTTACTTGGATGGGCTATGAGCTCCTTGACTCTGAAGGGCAAACCTTCTGATCATGCTCCAGTTCCTTCTGCGAGTTCTAGTACCCTCACACCAACATCTTCTAATGCCAGCTCAGTTGTAGATACTCCTTCAACAGCACCTATCCGTGTAAATTCCACACCAGATTTCACTGAGCACCATGCCCCTACATCTCCTACATCAACGGATGGCTGGGGAGACCTAGAGAATGGAATCGATGAGGAACCTGAAAATGACAAGGATGGGTGGGATGATCTAGAACCACTTGAAGAAACAAAGCCAACTCCAGCTCTTACTAACATTCAAGCAGCTCAAAGGCGGCCAGTTTCTCAACCTGCTTCACATGTAAAAGCTCCAATTTTGCGACCCAAAAGTACACCAAAGTTGAGCAAGGATGAAGATGATGATTTGTGGGGTTCCCTAGCAGCTCCTGCTCCAAAACCACCATCAAAACCTTTAAATTTGAAATCGACAGCAACTGATGATGATGATCCCTGGGCTGCCATTGCAGCTCCTGCTCCCACTACAAGAGCCAAGCCCTTATCAGCTGGAAGAGGTCGGGGAGCCAAACCAGCCGCTCCAAAATTAGGTGCTCAGCGGATAAGCCGGACATCATCCGGGACATAA	2388	0.4355	MFKFLKEVVGGSGTGIKDLPYNIGEPYPSAWGSWLHHRGTSKDDGSPVSIFSLSGSNAQDGHLAAGRNGVKRLRTVRHPNILSFLHSTEVETFDGGSSKVTIYIVTEPVMPLSDKIKELGLDGTQRDEYYAWGLHQIAKAVSFLNNDCKLVHGNVCLASVVVTQTLDWKLHAFDVLSEFDGSNETSSTQMLQYAWLVATQYKSMELAKSDWAAIKKSPPWAIDSWGMGCLIYELFSGLKLSKTEELRNTASIPKSLLPDYQRLLSSTPSRRLNTSKLIENSEYFQNKLVDTIHFMEILSLKDSVEKDTFFRKLPNLAEQLPREIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSAEEFRAKVLPTIIKLFASNDRAVRVSLLQHIDQFGESLSAQAVDEQVYPHVATGFSDTSAFLRELTLKSMLILAPKLSQRTLSGSLLKHLSKLQVDEEPAIRTNTTILLGNIASYLNEGTRKRVLINAFTVRALRDTFPPARGAGIMALCATSSNYDITEIATRILPNVVVLTIDPDSDVRSKAFQAVDQFLQMAKQHYEKTNIAETTGGAGMEGSSIPGNASLLGWAMSSLTLKGKPSDHAPVPSASSSTLTPTSSNASSVVDTPSTAPIRVNSTPDFTEHHAPTSPTSTDGWGDLENGIDEEPENDKDGWDDLEPLEETKPTPALTNIQAAQRRPVSQPASHVKAPILRPKSTPKLSKDEDDDLWGSLAAPAPKPPSKPLNLKSTATDDDDPWAAIAAPAPTTRAKPLSAGRGRGAKPAAPKLGAQRISRTSSGT*	796

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr5g0036	795	Gene3D	Transferase(Phosphotransferase) domain 1	110	279	-	-
	Tpr5g0036	795	Gene3D	Phosphorylase Kinase; domain 1	12	107	-	-
	Tpr5g0036	795	ProSiteProfiles	HEAT repeat profile.	366	404	IPR021133	-
	Tpr5g0036	795	SUPERFAMILY	ARM repeat	293	552	IPR016024	-
	Tpr5g0036	795	ProSiteProfiles	Protein kinase domain profile.	2	284	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Tpr5g0036	795	SUPERFAMILY	Protein kinase-like (PK-like)	37	287	IPR011009	-
	Tpr5g0036	795	MobiDBLite	consensus disorder prediction	601	652	-	-
	Tpr5g0036	795	MobiDBLite	consensus disorder prediction	594	653	-	-
	Tpr5g0036	795	PANTHER	SCY1-RELATED S/T PROTEIN KINASE-LIKE	1	793	-	-
	Tpr5g0036	795	Gene3D	-	282	561	IPR011989	-
	Tpr5g0036	795	MobiDBLite	consensus disorder prediction	682	696	-	-
	Tpr5g0036	795	SMART	serkin_6	2	284	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Tpr5g0036	795	PANTHER	-	1	793	-	-
	Tpr5g0036	795	MobiDBLite	consensus disorder prediction	681	795	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr5g0036	70	291	MAP Kinase Kinase Kinase	AT5G66850	25.000	1.00e-07	53.5

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	SCY1_SCYL1	Tpr5g0036		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr5g0036	K08876		-	gmx:100792884	1323.15