Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0029 ATGACTCTTTCTTCCAATGGCAAAACCAATTTCTCCCTTGAGATTCCCACCATCAAGTTCACTAAGCTCTTCATCAATGGAAAATTTGTTGATTCGATTTCAGGAAAAGAGTTTGAGACAATAGATCCAAGAAGTGGAGAGGTGATAGCGAAAATAGCAGAAGGAACAAAAGAAGATATTGATGTTGCTGTGAAAGCGGCACGTGTCGCTTTTGATGATGGTCCATGGCCTCGTATGCCCGGTGTTGCAAGAGCAAAAATCTTGACGAAATGGGCAGATTTAATTGAACAAAACATCGAAGAATTAGCAGCATTGGATACAATAGATGCCGGAAAATTGTACAGTTTCTGTAAAGCTGTTGACATACCTGGAGTTGCAGATACATTACGTTACTATGCCGGTGCTGCTGATAAAATTCACGGCGAGGTTTTAAAACCTGCTCGAGAGTTGCACGCGTATACTTTGATGGAACCGATTGGAGTTGTTGGACACATTATTCCTTGGAATTTTCCTAGTACTATGTTTGCTGCTAAGGTTGCTCCTTCTTTGGCTGCTGGTTGTACTATGGTTCTTAAGCCGGCTGAACAAACACCTCTCTCTGCTTTGTTTTATGCTCATCTTGCTAAGGAGGCTGGAATTCCAGATGGAGTACTCAATGTAGTACCTGGATTTGGTCAAACTGCAGGAGCTGCAATAAGCTCACATATGGACATTGATAAGGTTAGTTTTACTGGTTCGACCGAAGTAGGACGTGAAATAATGATATCTGCAGCTAGAAGTAATTTGAAACCAGTTTCACTTGAATTAGGAGGAAAATCACCCATCTTAATATTCGATGATGCTGATGTCGATAAAGCTGCTGAACTTGCTCTCTTAGGCATCGTATTTAATAAGGGAGAAATTTGTGTTGCGGGTTCTCGTGTGTTTGTTCAAGAAGGAATCTATGATGAATTTGAGAAGAAGTTGGTGGAGAAAGCAAAAGCTTGGGTTGTTGGTGATCCTTTTGATCCCAAAGTTCAGCAAGGACCTCAGGTTGACAAGAAGCAATTTGAAAAAATTCTTTCCTATATTGAACATGGAAAGAAAGATGGAGCAACCCTTTTGACAGGTGGTAAAAGAGTTGGAAACAAGGGTTACTACTTAGAACCTACAATTTTCTCTAATGTTAAGGAGGACATGCGTATAGCACAAGATGAAATATTTGGCCCTGTCATGGCACTTATGAAGTTCAAGACAATTGAGGAAGCAATTAAAAGTGCAAACAATACAAGATATGGTTTAGCAGCAGGAATTGTGACAAAGAATTTGGACATAGCAAACACTGTTTCAAGGTCTATTAGAGCTGGAATTATTTGGGTTAATTGCTACTTTGCCTTTGGAAGTGACATTCCTTATGGAGGGTACAAGATGAGTGGTTTTGGAAGAGATTTTGGATTGGAATCATTACATAAGTATTTACAAGTTAAATCTGTTGTGACTCCCATTTACAATTCTCCTTGGCTTTGA 1506 0.3964 MTLSSNGKTNFSLEIPTIKFTKLFINGKFVDSISGKEFETIDPRSGEVIAKIAEGTKEDIDVAVKAARVAFDDGPWPRMPGVARAKILTKWADLIEQNIEELAALDTIDAGKLYSFCKAVDIPGVADTLRYYAGAADKIHGEVLKPARELHAYTLMEPIGVVGHIIPWNFPSTMFAAKVAPSLAAGCTMVLKPAEQTPLSALFYAHLAKEAGIPDGVLNVVPGFGQTAGAAISSHMDIDKVSFTGSTEVGREIMISAARSNLKPVSLELGGKSPILIFDDADVDKAAELALLGIVFNKGEICVAGSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQVDKKQFEKILSYIEHGKKDGATLLTGGKRVGNKGYYLEPTIFSNVKEDMRIAQDEIFGPVMALMKFKTIEEAIKSANNTRYGLAAGIVTKNLDIANTVSRSIRAGIIWVNCYFAFGSDIPYGGYKMSGFGRDFGLESLHKYLQVKSVVTPIYNSPWL* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0029 501 SUPERFAMILY ALDH-like 15 497 IPR016161 GO:0016491
Tpr5g0029 501 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 2 501 - -
Tpr5g0029 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 489 IPR016162 GO:0016491
Tpr5g0029 501 Pfam Aldehyde dehydrogenase family 30 491 IPR015590 GO:0016491
Tpr5g0029 501 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 2 501 - -
Tpr5g0029 501 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 295 306 IPR016160 GO:0016491
Tpr5g0029 501 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 267 274 IPR029510 GO:0016491
Tpr5g0029 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 271 460 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0029 Tpr-Chr5 394158 404628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0029 6 501 Aldehyde Dehydrogenase Gene Family AT3G24503 72.745 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0029 K12355 - gmx:100783920 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0385 3 4141578 4146811 Tpr5g0029 5 394158 404628 PCT