Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0025 ATGGAAGACGATGCTAGATACCCATCAAAAGGTTACCCATTCAGACGCAAAAACCCTAACCTTCGTCAAAAACATCCAATTCGCAATTTACAATATCATCACTACAACGATCCTGAAGACAACAACAACATCGACGAAGAATTCGACGATTACAATATAGATGAAGACGGAATTGAAAATGGGTATATCGGTAATTTCGAAGAAAACAAAGGGTTCATCGGTAAAAAGAGAAAATTGCGTAGCGGTGGTAGTAGTAGTGGTGGTGGTGGTGGTTCTGTTTCAAATTATGAATTGGTGCCACGTGGAAAATTCTCATACATTAATCGCGGCGGTGGTGGTGGTGTCGGCGGTGGTGGTTCTTCTGGGTCAGAGGAATGGACAGAACATGCAACATTTGTGTTGTTAGAGATTTGGGGTGAAAAGTTTCTTCAACTTGGAAGAAACAGTTTGAGATCAGAGGAATGGCATGAAGTATCTGAGAAAGTTTCTGAAGAATTGAAAATTGAAAGGAGTGTTGAACAATGTAGAAGTGTATTGGATAAAGTGAAAAGAAGGTATAAGAAAGAGAAGAGTAGAATGGATGAAATGGGTTTGGGTGTAAATTCTTGTAAGTGGCCATTTTTTAAGAGAATGGATATGTTGATGTCTTCGAGTGCGAGACAAGAGTATGGACTTGCTTGCGGTGTTGATTCGGGGGAATATGTGTTTATGAATACTCGGGTTTATTTGAATAGGTCGAATGGTTTTGATGAGATGAGGGATAGTCCTGGTGAGTCTGAGGCATCTGATGATGAGGAGGAGGATGGTGATGATGATGATTTGGATGAGGTTGATAAGGAAGAGGAGGAGGCTTCTTATAGGGTTTTGGCTGATTCTATTCAGAAGTTTGGGAAGATATATGAGAAGATTGAGAATACTAAGAGGCAACAAATGATGGAGTTGGAGAAGATGAGGTTGGATTTTAATAGGGAGTTGGAGTTGCAGAAGAAGCAGATTTTGGAAAGGGCTCAGGCTGAAATATCAAAAATACAGGAACCAGGAGATGATGGTCATGATGAAGAGGTGGAGGATGGAGAAGAGACAGGCACTTCTGCAGATAATCTCAGTGAATAA 1113 0.4061 MEDDARYPSKGYPFRRKNPNLRQKHPIRNLQYHHYNDPEDNNNIDEEFDDYNIDEDGIENGYIGNFEENKGFIGKKRKLRSGGSSSGGGGGSVSNYELVPRGKFSYINRGGGGGVGGGGSSGSEEWTEHATFVLLEIWGEKFLQLGRNSLRSEEWHEVSEKVSEELKIERSVEQCRSVLDKVKRRYKKEKSRMDEMGLGVNSCKWPFFKRMDMLMSSSARQEYGLACGVDSGEYVFMNTRVYLNRSNGFDEMRDSPGESEASDDEEEDGDDDDLDEVDKEEEEASYRVLADSIQKFGKIYEKIENTKRQQMMELEKMRLDFNRELELQKKQILERAQAEISKIQEPGDDGHDEEVEDGEETGTSADNLSE* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0025 370 Coils Coil 300 342 - -
Tpr5g0025 370 MobiDBLite consensus disorder prediction 340 370 - -
Tpr5g0025 370 MobiDBLite consensus disorder prediction 248 284 - -
Tpr5g0025 370 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 35 357 IPR044823 -
Tpr5g0025 370 Pfam Myb/SANT-like DNA-binding domain 124 213 IPR044822 -
Tpr5g0025 370 Gene3D - 126 188 - -
Tpr5g0025 370 MobiDBLite consensus disorder prediction 257 280 - -
Tpr5g0025 370 MobiDBLite consensus disorder prediction 1 23 - -
Tpr5g0025 370 PANTHER ALCOHOL DEHYDROGENASE TRANSCRIPTION FACTOR MYB/SANT-LIKE FAMILY PROTEIN 35 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0025 Tpr-Chr5 342372 345536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0025 254 345 Trihelix Transcription Factor Family AT3G14180 36.634 4.22e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Tpr5g0025 Myb_DNA-bind_4 1.1e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0025 - - ccaj:109813475 406.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0025 5 342372 345536 Tpr5g0025 5 342372 345536 ECH