Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0023 ATGGCAAAAGTTCAAGAGATTCATCATAATGGGGTGAACTTATCAACCCAAAGAACTTTTGGAACAAAATTCACATCGGGGTTGAAAGAAACATTTTTTCCTGATGATCCATTTAGACAAATTACGGAAGAAGAAAAATCATCTCGTAGGTGTATTAAAGGGGTGCAATATTTTGTTCCAATTTTTGAGTGGTTACCAAATTATACTTTGAGATTATTTTTCTCTGACTTAATTGCTGGTCTCACCATTGCTAGTCTTGCCATTCCTCAAGGCATTAGTTATGCCAAACTTGCCAATCTTCCTCCTCTCGTCGGCCTATATTCAAGTTTTGTGCCACCATTAGTGTATGCTGTTTTTGGGAGTTCAAGGCACATGGCAGTTGGGACAATAGCAGCAGCATCATTGCTTATTGGCAACACAATATCAACTGTAGCAGACCATGAAACAGAACCAGCATTGTATCTTCATTTGATTTTCACAACAACATTTGTCACTGGTGTTTTCCAAACTTGTTTAGGTTTTTTCAGGCTTGGAATATTAGTTGATTTCTTTTCCCATTCTACCATCACTGGCTTTATGGGAGGAACTGCAGTGATTCTAATCCTTCAACAACTAAAGGGTATATTTGGAATGAAACATTTTGCAACTAAAACCAATCTTGTGGCAGTGATTGAGGGCATCTTCACCAATAGACAAGAGATAAGATGGGAAACAGCAGTTCTTGGAATATTCTTCCTTATTTTCTTGCAATTTACAAGGCATCTGAGAGTTAAAAAACCAAAACTCTTTTGGGTATCAGCTATAGCTCCAATGACAACTGTAGTTATTGGTGGCATTTTTACATACCTTGTCAAGGGTCAAAATCATGGAATTCAAATTGTGGGGCATCTAGACAAAGGATTAAATCCTATATCAATCCAATATTTGACCTTTGATAAAAGATATTTACCAGCAGTGATGAGAGCTGGATTAATCACTGGAGTATTATCATTAGCGGAAGGAATAGCCATAGGAAGAAGTTTTTCTGTTACTGATAATACACCTCATGATGGGAATAAAGAGATGATAGCTTTTGGACTTATGAACTTATTTGGTTCTTTTACATCATGCTACTTAACTAGTGGACCATTTTCCAAGACAGCTGTGAATTATAATGCAGGATGTAAAACTGCAATGGCAAATGTTGTACAAGCAATAATAATGGCTCTAACACTACAATTTTTTGCTCCATTATTTAGTAACACACCACTTGTTGCTCTATCAGCTATTATTGTATCAGCCATGTTGGGGTTGATAAATTATACAGAAGTTATCTATCTTTTTAAAGTTGACAAATTTGATTTTGTTATTTGCATGAGTGCATTCTTGGGTGTTACTTTTATAAGTATGGATATGGGCCTCATGATCTCTGTTGGGCTAGGTTTACTTAGAGGATTATTATATACAGCTAGACCAGCAGCATGTAGGCTTGGAAAATTACCAGATTCTGGTTTATATAGAGATGTTGAGCAATATTCTAATGCTTCAACAGTTCCAGGAGTTCTAATTATACTAGTTGGTTCACCTGTTTACTTTTCAAATTCTACTTACCTCAAAGAAAGGATTTTGAGATACATTCAAAGTGAACAAAGCTCTTCAGGAAATACCGTTGAATACGTCATACTCGATTTAACCGGAGTAACATCCATTGACACAACTGCTATTGAAGGATTATTGGAAACAAGTAAAATATTGGAAAGGAAAGGAATTAAGATGTCACTAGTAAACCCAAGATTGGAGGTTATGGAGAAGCTATTAGCATCAAAATTTGTTGAACATATTGGAAAGGAAGCATTCTATCTAAATTTGGATGATGCAGTGATTGCAAGTCAATATTCACTAAGAACATCCAAGACAAACAATAATGACGACACAGTATAA 1920 0.3568 MAKVQEIHHNGVNLSTQRTFGTKFTSGLKETFFPDDPFRQITEEEKSSRRCIKGVQYFVPIFEWLPNYTLRLFFSDLIAGLTIASLAIPQGISYAKLANLPPLVGLYSSFVPPLVYAVFGSSRHMAVGTIAAASLLIGNTISTVADHETEPALYLHLIFTTTFVTGVFQTCLGFFRLGILVDFFSHSTITGFMGGTAVILILQQLKGIFGMKHFATKTNLVAVIEGIFTNRQEIRWETAVLGIFFLIFLQFTRHLRVKKPKLFWVSAIAPMTTVVIGGIFTYLVKGQNHGIQIVGHLDKGLNPISIQYLTFDKRYLPAVMRAGLITGVLSLAEGIAIGRSFSVTDNTPHDGNKEMIAFGLMNLFGSFTSCYLTSGPFSKTAVNYNAGCKTAMANVVQAIIMALTLQFFAPLFSNTPLVALSAIIVSAMLGLINYTEVIYLFKVDKFDFVICMSAFLGVTFISMDMGLMISVGLGLLRGLLYTARPAACRLGKLPDSGLYRDVEQYSNASTVPGVLIILVGSPVYFSNSTYLKERILRYIQSEQSSSGNTVEYVILDLTGVTSIDTTAIEGLLETSKILERKGIKMSLVNPRLEVMEKLLASKFVEHIGKEAFYLNLDDAVIASQYSLRTSKTNNNDDTV* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0023 639 Pfam Sulfate permease family 73 453 IPR011547 GO:0016021
Tpr5g0023 639 PANTHER SULFATE TRANSPORTER 3.5-RELATED 6 634 IPR030316 GO:1902358
Tpr5g0023 639 TIGRFAM sulP: sulfate permease 60 619 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tpr5g0023 639 ProSitePatterns SLC26A transporters signature. 102 123 IPR018045 GO:0008271|GO:0008272
Tpr5g0023 639 ProSiteProfiles STAS domain profile. 504 623 IPR002645 -
Tpr5g0023 639 SUPERFAMILY SpoIIaa-like 508 620 IPR036513 -
Tpr5g0023 639 CDD STAS_SulP_like_sulfate_transporter 505 616 - -
Tpr5g0023 639 Pfam STAS domain 505 619 IPR002645 -
Tpr5g0023 639 PANTHER SULFATE TRANSPORTER 6 634 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tpr5g0023 639 Gene3D STAS domain 484 626 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0023 Tpr-Chr5 318298 325427 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0023 10 631 Inorganic Solute Cotransporters AT5G19600 60.772 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0023 K17471 - gmx:100789107 920.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0023 5 318298 325427 Tpr5g0023 5 318298 325427 ECH