Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0005 ATGACAGAACCGGCATCATCTGCGGAATCTTGCACTGGAAACACCGAGGAGGAAAGCTCGTCGCTGCCTCCTGAAATAGCAATTGGAATTGACATTGGCACCACACCATGTGGTGTTTCTGTTTGGAATGGTTCCCAATTTGATATTTGGACAGGCGAAATGAATGAGATGATGAAGAAATGTTTCGAAACTTCCAAAGATCATGACTTTTCTATTGGAGCAAGTAGTAGCAGCAGTAGTAGTACTGAAGTCTCACTCGAGAATGAGAAGATGAATCAGTTCTTTAACATAATTTTCGGTGAAAGTGCAAAACTTCCATTTCTGATGCACACCGTGGACATTGAGGTTCACCCTTTTGTTGCTGCATTTATGAACAAACTGTGGAAATCCACTACTGCAGTAGAACTACTTGGAAAATTTCTAACGGAATTAAGATTAATCGTTGAAACTCGTCTGAACAAAGCTATAAGAATGGTAGTGTTTACAGTTCCGGTTTCATTCAGTCGATTGCAGGTAAACCGGATATATGACGCTTGTGCGATGGCCGATCTTAAAGTTATCAAACTGATGCCTCAACCAATAGCAGTGGCTTTGTGGTATGTGAGCCATCAGCTGTATGGTTCTTCTGATGAGGTTATGGACAATGAAAGCAAAAAAAATGCTCTCGTTTTCAATATGGATGCCGGTTATTGTGATGTTTCTGTTATTGAAACAGAAAGAGGAAAATTGCGAATAAAAGCCATGACAGGAAGTACTATTGGTGTAGAAGATTTGCTTGGAAATATGATGTGTCATCTCTTACCTGATTCTGAAAAGATATTCAAGAGACATGTTCACTGGAACTCAGATATTATATCGATGGCTTATCTTCGAAGTAGAATCCACGATGTGATTACCAAGCTTTCGACTGAGACAAGTGTTGATGTTGATTTAGAGTCGATAGATGGTTTGAAGATACACAGGGTTGTAACGCGGAAGGAGCTTGAGGATGTAAACAAAAAGTTGTTTGAGAAGTGTGAAAATCTAATCTACGAATGCTTGCAAGATGCAAAGATAGAAGCCGAGAATATAACTGATATCATAATTGTAGGCGGATGTTGTAATATACCAAGGGTGAAGAGTCTTGTTACGGAAATATGCAATGGAAAGGAAATATATGAAGGTATAGATCCTTTGAATGCTGTACTTTATGGTGCAGTAGTGGCAGGAGCTCATAAAATGGACTCTTCTACTTCTCAAGTCACACTTCATGCCATCGGAATTCAATGTGATGGAGAGAAATTCGTACCTGTTATTCCTAAGAACACATCAGTGCCAACGGCGTGGGATATGGTGTTTTCAACTGTTGATGATAATCAAACTACGGCATTGATTGTTGTCTGTGAAGGCGTTGAGGAGGGACAAAAGGCTGAAGAAAACAATGTTTTGGGAAATTTCGAAATAACTGAAATACCTGAAGCACCAAAAGGAGTTCCTGACATCACTGTTTCGATGAGCATAGACCGTAAAAACATTTTGAAAATTACTGCTTCTGTTGGGATGCCAAGATTTGCTCATGTAATTACAAATTTTGATGATCGGTTCTTAATTAGAACATATGATGATACAATAGATTTGGCTAATCTCCTCGATGCGGAACAATAA 1644 0.3911 MTEPASSAESCTGNTEEESSSLPPEIAIGIDIGTTPCGVSVWNGSQFDIWTGEMNEMMKKCFETSKDHDFSIGASSSSSSSTEVSLENEKMNQFFNIIFGESAKLPFLMHTVDIEVHPFVAAFMNKLWKSTTAVELLGKFLTELRLIVETRLNKAIRMVVFTVPVSFSRLQVNRIYDACAMADLKVIKLMPQPIAVALWYVSHQLYGSSDEVMDNESKKNALVFNMDAGYCDVSVIETERGKLRIKAMTGSTIGVEDLLGNMMCHLLPDSEKIFKRHVHWNSDIISMAYLRSRIHDVITKLSTETSVDVDLESIDGLKIHRVVTRKELEDVNKKLFEKCENLIYECLQDAKIEAENITDIIIVGGCCNIPRVKSLVTEICNGKEIYEGIDPLNAVLYGAVVAGAHKMDSSTSQVTLHAIGIQCDGEKFVPVIPKNTSVPTAWDMVFSTVDDNQTTALIVVCEGVEEGQKAEENNVLGNFEITEIPEAPKGVPDITVSMSIDRKNILKITASVGMPRFAHVITNFDDRFLIRTYDDTIDLANLLDAEQ* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0005 547 Gene3D - 89 139 - -
Tpr5g0005 547 Pfam Hsp70 protein 27 511 IPR013126 GO:0005524|GO:0140662
Tpr5g0005 547 Gene3D - 214 386 - -
Tpr5g0005 547 PANTHER HEAT SHOCK PROTEIN 70KDA 19 535 IPR013126 GO:0005524|GO:0140662
Tpr5g0005 547 SUPERFAMILY Actin-like ATPase domain 26 202 IPR043129 -
Tpr5g0005 547 Gene3D - 28 403 - -
Tpr5g0005 547 CDD HSP70_NBD 28 404 - -
Tpr5g0005 547 MobiDBLite consensus disorder prediction 1 23 - -
Tpr5g0005 547 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 404 523 IPR029047 -
Tpr5g0005 547 SUPERFAMILY Actin-like ATPase domain 218 405 IPR043129 -
Tpr5g0005 547 Coils Coil 325 345 - -
Tpr5g0005 547 MobiDBLite consensus disorder prediction 1 21 - -
Tpr5g0005 547 Gene3D Actin; Chain A, domain 4 255 338 - -
Tpr5g0005 547 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 414 513 IPR029047 -
Tpr5g0005 547 PRINTS 70kDa heat shock protein signature 26 39 - -
Tpr5g0005 547 PRINTS 70kDa heat shock protein signature 159 179 - -
Tpr5g0005 547 PRINTS 70kDa heat shock protein signature 357 373 - -
Tpr5g0005 547 PRINTS 70kDa heat shock protein signature 389 409 - -
Tpr5g0005 547 PRINTS 70kDa heat shock protein signature 491 507 - -
Tpr5g0005 547 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 19 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0005 Tpr-Chr5 91101 92744 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0005 27 510 Calmodulin-binding Proteins AT3G09440 30.800 3.21e-67 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0005 K09489 - gmx:100809773 481.87