Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0004 ATGATATCAACAAAGATGACAGAACCGGCATATACTGCGGCATCTTGGACTGAAAACACCGAGGAGGAAAGCTCGTCACTGCCTCCTGAAATAACAATCGGAATTGACATTGGCACGTGGCCATGTTGTATTTCTGTGTGGAATGGTTCCGAAGTGGAGCTTTGGAAAAAGAACATAAACGAGATGATGAAGAGATCTTGCGAAACTTCCAAAGATCGTGACTCTTCTATTGGAGCTAGTAGTACTGAAGTCTCAATCTGCCTAGAAAAAGAGATTAAAATCTTATACATGAAAGACTTTTGTAGCACAGTTTTCGGTGAAAATGCAAGTTTTCCGTTTCTGATGCATACCGTGGATATTAAGGTTCGCCCTTTTGTTGCTGCATATGTGAACAAACTGTGGAAATCTGCTACTGTAGAAGAACTACTTGGAAAATTTATGATAGAATTGAGATCAATGGTTGAAACTCATCTGGACAAACCTATAAGAAATGTAGTGTGTACAGTTCCAGTTTCATTCAGTCAATTGCAGCTAAACTGGATACATTGCGCTTGTGCGATGGCCGGTCTTAAAGGTATCGGACTGATGCCTAAACCAACAGCAGTGGCTTTGTGGTATGTGGTTCATCAACTGACTTCTTCTGCTTCTAACAATGAAAGCATGAAAATTGCTCTCATTTTTAATATGGATGCTGGTTATTGTGATGTTTCTGTCATTGAAGCAGAAAAAGGAAAATTCCGAACAAAAGCCTCGACAGAAAGTTCTATTGGTGGAGAAGATTTGCTTGGAAATATGATGTCTTATCTTTTACCTGATTTTGAAGAGATATTCAAGAGACTTGTTCATTGGAATTCAGAAATTATATTAATGGCTTTTCTTCGAAGTAGAATCCATGACGTGATTACTAAGCTTTCGTCTGAGACAAGTGTTGAGGTTGATTTAGATTTGGGATATGGTTTGAAGATATGCAAGGTTGTAACGCGGAAGGAGTTTGAGGAAGTTAACAAAGAGGTGTTTGAGAAGTGTGAAAAGTTAATCATCCAATGCTTGCAAGATGCAAAGATAGAAGTTGAGAATATAAATGATGTGATAATTGTCGGTGGATGTTGTAATATACCAAAGGTGAAGAATCTTGTTACTGAAATATGCAATGGAAAGGAAATTTATAAAGGTATGAATCCTTTGAATGCTGTACTTTGTGGTGCCGCGGTAGCAGGAGCTGTTGATGATGACATTGGTAACATGGACTTGTTTGCTTCTAGTAAATGGAAAGCAAATTTATAA 1284 0.3801 MISTKMTEPAYTAASWTENTEEESSSLPPEITIGIDIGTWPCCISVWNGSEVELWKKNINEMMKRSCETSKDRDSSIGASSTEVSICLEKEIKILYMKDFCSTVFGENASFPFLMHTVDIKVRPFVAAYVNKLWKSATVEELLGKFMIELRSMVETHLDKPIRNVVCTVPVSFSQLQLNWIHCACAMAGLKGIGLMPKPTAVALWYVVHQLTSSASNNESMKIALIFNMDAGYCDVSVIEAEKGKFRTKASTESSIGGEDLLGNMMSYLLPDFEEIFKRLVHWNSEIILMAFLRSRIHDVITKLSSETSVEVDLDLGYGLKICKVVTRKEFEEVNKEVFEKCEKLIIQCLQDAKIEVENINDVIIVGGCCNIPKVKNLVTEICNGKEIYKGMNPLNAVLCGAAVAGAVDDDIGNMDLFASSKWKANL* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0004 427 Gene3D - 95 145 - -
Tpr5g0004 427 Gene3D Actin; Chain A, domain 4 258 341 - -
Tpr5g0004 427 Gene3D - 33 406 - -
Tpr5g0004 427 PANTHER HEAT SHOCK PROTEIN 70KDA 11 414 IPR013126 GO:0005524|GO:0140662
Tpr5g0004 427 Gene3D - 217 389 - -
Tpr5g0004 427 Pfam Hsp70 protein 33 408 IPR013126 GO:0005524|GO:0140662
Tpr5g0004 427 MobiDBLite consensus disorder prediction 1 27 - -
Tpr5g0004 427 CDD HSP70_NBD 116 407 - -
Tpr5g0004 427 PRINTS 70kDa heat shock protein signature 31 44 - -
Tpr5g0004 427 PRINTS 70kDa heat shock protein signature 165 185 - -
Tpr5g0004 427 PRINTS 70kDa heat shock protein signature 232 242 - -
Tpr5g0004 427 PRINTS 70kDa heat shock protein signature 360 376 - -
Tpr5g0004 427 PRINTS 70kDa heat shock protein signature 392 412 - -
Tpr5g0004 427 SUPERFAMILY Actin-like ATPase domain 223 407 IPR043129 -
Tpr5g0004 427 SUPERFAMILY Actin-like ATPase domain 32 208 IPR043129 -
Tpr5g0004 427 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 11 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0004 Tpr-Chr5 85545 87520 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0004 33 425 Calmodulin-binding Proteins AT5G02500 30.424 2.55e-50 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0004 K09489 - gmx:100809773 385.956