Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0001 ATGACAGAACCTGCAGCATCTGCGGAATCTTGCACTGGAAACACAATTTGCACTGAAAACACCGAGGAGGAAAGCTCGTCTCTGCCTCCTGATATAGCAATTGGAATTGACATTGGCACCACACCATGTTGTGTTTCTGTTTGGAATGGTCCCCAATTGAAGATTTTGACAGGCAATATGAATGAGATGATGAAGAAATGTTTCGAAACTTCCAAAGATCATGACTTTTCTATTGGAGCTAGTAGTAGCAGCAGTAGTAGTACTGAAGTCTCACTCGAGAATGAGAACATGAATCAGTTCTTTAACATAATTTTCAGTGAAAGGGCAAAACTTCCATTTCTGATGCACACCGTGGACATTGAGGTTCGCCCTTTTGTTGCTGCATTTATGAAGAAACTGTGGAAATCCACTACTGCAGTAGAACTACTTGGAAAATTTCTAACGGAAATAAGATCAATCGTTGAAACTCGTCTGAACAAACCTATAAGAATGGTAGTGTTTACAGTTCCGGTTTCATTCAGTCGATTGCAGGTAAACCGGATATATGACGCTTGTGCGATGGCCGATCTTAAAGTTATCAGACTGATGCTTCAACCAATAGCAGTGGCTTTGTGGTATGTGATTCAGCAGTATGCTTCTTCTGATAAGGTTATGGACAATGAAAGCAAAAAAATTGCTCTCGTTTTCAATATGGATGCCGGTTATTGCGATGTTTCTGTTATTGAAGCAGAAAGAGAAAAATTGCGAATAAAAGCCATGACGGGAAGTACTATTGGTGTAGAAGATTTGCTTGGAAATATGATGTGTCATCTCTTACCTGATTCTGAAGAGATATTCAAGAGACCTGTTCACTGGAACTCAGATATATTACCGATGGCTTTTCTTCGAAGTGGAATCCACAACTTGATTACCAATCTTTCGACTGAGACAAGTGATGAGGTTGATTTAGAGTCGATAGATGGTTTGAAGATACAAAGGGTTGTAACGCGGAATGAGTTTGAGGATGTAAACAAAAAGTTGTTTGAGAAGTGTGAAAATCTAATCTACCAATGCTTGCAAGATGCAAAGATAGAAGCCGAGAATATAACTGATATCATAATTGTAGGCGGATGTTGCAATATACCAAGGGTGAAGAATCTTGTTACGGAAATATGCAATGGAAAGGAAATATATGAAGGGATAGATCCTTTGGATGCTGTACTTTATGGTGCAGCACTGGCAGGAGCTCATAAAATGGACTCTGTTACTTCTCAAGTCACACTTCATGCCATCGGAATTCAATGTGATGGAGTGAATTTCGTACCTGTTATTCCGAAGAACACATCATTGCCAACGGTGGGGGATATGGTGTTTTCAACTATTGATGATAATCAAACTACGGCATCGATTGTTGTCTGCGAAGGCGTTGAGGAGGGACAAAATGCTGAAGAAAACAATGTTTTGGGAAATTTCAAAATAACTGAAATACCTGAAGCACCAAAAGGAGTTCCTGAAATCACTGTTTCAATGAGCATAGACCGTAAAAGCATTTTGACAATTACTGCTTATGTTGGGATGCCAAGATTTACTCCTGTGGTTACAAATTTTGATGATCAGTTCCTAATTAGAACATATGATTATACAATAAATTTGAGCTAA 1638 0.3895 MTEPAASAESCTGNTICTENTEEESSSLPPDIAIGIDIGTTPCCVSVWNGPQLKILTGNMNEMMKKCFETSKDHDFSIGASSSSSSSTEVSLENENMNQFFNIIFSERAKLPFLMHTVDIEVRPFVAAFMKKLWKSTTAVELLGKFLTEIRSIVETRLNKPIRMVVFTVPVSFSRLQVNRIYDACAMADLKVIRLMLQPIAVALWYVIQQYASSDKVMDNESKKIALVFNMDAGYCDVSVIEAEREKLRIKAMTGSTIGVEDLLGNMMCHLLPDSEEIFKRPVHWNSDILPMAFLRSGIHNLITNLSTETSDEVDLESIDGLKIQRVVTRNEFEDVNKKLFEKCENLIYQCLQDAKIEAENITDIIIVGGCCNIPRVKNLVTEICNGKEIYEGIDPLDAVLYGAALAGAHKMDSVTSQVTLHAIGIQCDGVNFVPVIPKNTSLPTVGDMVFSTIDDNQTTASIVVCEGVEEGQNAEENNVLGNFKITEIPEAPKGVPEITVSMSIDRKSILTITAYVGMPRFTPVVTNFDDQFLIRTYDYTINLS* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0001 545 Gene3D Actin; Chain A, domain 4 260 343 - -
Tpr5g0001 545 Pfam Hsp70 protein 33 515 IPR013126 GO:0005524|GO:0140662
Tpr5g0001 545 CDD HSP70_NBD 34 409 - -
Tpr5g0001 545 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 419 517 IPR029047 -
Tpr5g0001 545 SUPERFAMILY Actin-like ATPase domain 224 410 IPR043129 -
Tpr5g0001 545 PANTHER HEAT SHOCK PROTEIN 70KDA 26 526 IPR013126 GO:0005524|GO:0140662
Tpr5g0001 545 SUPERFAMILY Actin-like ATPase domain 33 208 IPR043129 -
Tpr5g0001 545 Gene3D - 95 145 - -
Tpr5g0001 545 PRINTS 70kDa heat shock protein signature 32 45 - -
Tpr5g0001 545 PRINTS 70kDa heat shock protein signature 165 185 - -
Tpr5g0001 545 PRINTS 70kDa heat shock protein signature 234 244 - -
Tpr5g0001 545 PRINTS 70kDa heat shock protein signature 362 378 - -
Tpr5g0001 545 PRINTS 70kDa heat shock protein signature 394 414 - -
Tpr5g0001 545 PRINTS 70kDa heat shock protein signature 496 512 - -
Tpr5g0001 545 Gene3D - 34 407 - -
Tpr5g0001 545 MobiDBLite consensus disorder prediction 1 26 - -
Tpr5g0001 545 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 408 519 IPR029047 -
Tpr5g0001 545 Gene3D - 219 391 - -
Tpr5g0001 545 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 26 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0001 Tpr-Chr5 39931 41568 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0001 33 515 Calmodulin-binding Proteins AT3G12580 30.461 3.26e-69 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0001 K09489 - gmx:100809773 468.774