Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4972 ATGATCATAAACGTGAGAGATTCGACAATGGTGCGGCCGTCGGAGGAGGTTACACGACGGACTCTGTGGAACTCCAACGTTGATTTGGTGGTACCAAATTTCCACACACCAAGTGTTTATTTCTACAGATCAAACAATGGGACTTCCAATTTCTTTGATGCCAAGATAATGAAGGAAGCTCTAAGCAAGGTGCTTGTCCCGTTCTATCCAATGGCTGGCCGTCTTCGTCGTGATGAAGACGGCCGTGTTGAGATTGACTGTGATGGTCAAGGGGTGCTCTTTGTGGAGGCCGACACTGGGGCGGTCATCGATGATTTTGGTGACTTTGCTCCCACACTTGAGCTCCGTCAGCTTATCCCAGTCGTTGATTATTCGCGAGGAATTGAATCGTATCCCCTTCTAGTATTGCAGGTAACATATTTCAAATGTGGAGGAGTGTCCCTTGGTGTTGGTATGCAACATCATGTAGCAGATGGAGCTTCTGGTCTTCACTTCATCAATACATGGTCAGACGTAGCTCGTGGCCTAGACGTTTCAATCCCACCATTCATCGACCGGACACTACTTCGTGCCCGCGATCCACCACGACCTGTTTTTGATCATATTGAATACAAGCCACCACCATCCATGAAGACTACTCAACAGTCTACAAAACCAGGCTCAGATGGCGCAGCAGTTTCGATTTTCAAATTGACTCGCGAACAACTCAGCACGTTGAAAGCTAAGTCCAAAGAAGCAGGAAACACAATCCACTACAGCTCTTATGAGATGTTAGCTGGTCATGTTTGGAGAAGTGTCTGCAAAGCAAGATCGTTGCCTGATGATCAAGAAACCAAATTATATATTGCAACTGATGGACGGGCAAGATTGCAGCCTCCACCTCCACCGGGCTACTTCGGCAATGTGATATTCACAACAACGCCGATAGCTATAGCAGGTGATCTCATGTCGAAACCTACATGGTATGCTGCGAGTAGAATTCACAACGCGTTGTCGCGAATGGACAACGATTATTTAAGATCTGCACTTGATTTTCTTGAGCTACAACCTGATTTAAAAGCTCTTGTTCGTGGTGCGCATACTTTCAAGTGCCCGAATCTTGGTATTACTAGTTGGGCTAGGCTTCCGATTCATGATGCTGATTTTGGTTGGGGAAGGCCTATTTTCATGGGACCAGGTGGAATTGCTTATGAAGGTTTGTCTTTCATAATTCCAAGCTCAACAAATGATGGAAGTTTATCTGTGGCAATTGCTCTTCAGCATGAGCATATGAAAGTGTTTAAGGAATTCTTGTATGATATCTGA 1305 0.4544 MIINVRDSTMVRPSEEVTRRTLWNSNVDLVVPNFHTPSVYFYRSNNGTSNFFDAKIMKEALSKVLVPFYPMAGRLRRDEDGRVEIDCDGQGVLFVEADTGAVIDDFGDFAPTLELRQLIPVVDYSRGIESYPLLVLQVTYFKCGGVSLGVGMQHHVADGASGLHFINTWSDVARGLDVSIPPFIDRTLLRARDPPRPVFDHIEYKPPPSMKTTQQSTKPGSDGAAVSIFKLTREQLSTLKAKSKEAGNTIHYSSYEMLAGHVWRSVCKARSLPDDQETKLYIATDGRARLQPPPPPGYFGNVIFTTTPIAIAGDLMSKPTWYAASRIHNALSRMDNDYLRSALDFLELQPDLKALVRGAHTFKCPNLGITSWARLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSTNDGSLSVAIALQHEHMKVFKEFLYDI* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4972 434 Gene3D - 1 206 IPR023213 -
Tpr4g4972 434 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 433 - -
Tpr4g4972 434 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 4 433 - -
Tpr4g4972 434 Pfam Transferase family 3 429 - -
Tpr4g4972 434 Gene3D - 215 434 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4972 Tpr-Chr4 60421682 60426373 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4972 1 434 Monolignol Biosynthesis Gene Families AT5G48930 77.419 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4972 K13065 - gmx:100820075 819.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4972 4 60421682 60426373 Tpr4g4972 4 60421682 60426373 ECH
Tpr3g3612 3 40104097 40106527 Tpr4g4972 4 60421682 60426373 PCT