Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4970 ATGGGGATATATCTGAGTACGCCGAAAACCGAGAAGGCATCTGAAGATGGTGAGAATGACATGCTCCGATTCGGTTTGTCATCCATGCAGGGCTGGCGTGCTACTATGGAAGATGCTCATGCAGCTCATCCGTATTTGGACGAGTCTACGTCTTACTTTGGTGTTTATGATGGCCACGGAGGTAAAGCTGTTTCAAAATTCTGTGCAAAGTTTCTACATCAGCAGGTGCTTAGGCATGAAGCTTATGTAGCTGGAGATATAGCCACGTCTTTACAGAAATCTTTCCTCAGAATGGATGACATGATGCGCGGACAAAGAGGATGGAGAGAATTAGCAGTCTTGGGAGATAAAATAGAAAAGTTGTCTGGTATGCTAGAGGGGTTTATATGGTCTCCCAGGAGTAGTGAAGCCAATGAACGTGCTGATGAGTGGGCTTTTGAGGAGGGACCCCATTCTGATTTCAGTGGGCCAAACTCTGGAAGCACAGCATGTGTGGCTGTCATCCGAGGAAAAAAACTTGTTGTTGCAAATGCTGGTGATTCTAGATGTGTGTTATCAAGGAAAGGCCAGGCACACAATTTGTCTAAAGATCACAAGCCTGACCTTGAGGTTGAGAAAGACAGAATTTTGAAAGCTGGTGGTTTCATCCAAGTTGGACGAGTCAATGGAAGTTTGAATTTGGCTAGAGCAATTGGAGATATGGAATTTAAGCAGAACAAGTATTTGCCTGCTGAAAAGCAGGTTGTGACTGCTGATCCGGACGTAACGTCAGTCGAGCTTTGCGACGATGATGAGTTTCTTGTGATAGCTTGTGATGGAATATGGGATTGCATGTCCAGCCAACAGCTTGTGGACTTTATACATGGCCAGTTAAAGACGGAGAATAAACTTTCTGCGGTTTGTGAGAAAGTATTTGATAGGTGCTTGGCACCAACAGCTGGTGGTGAGGGATGTGATAACATGACCATGATCTTGATTCAGTTCAAAAATATTCCGACCTCAGATGCTTCTGACATAGACCAGCCTGAGTCATCTGCTCAACTGACTCCAAATCCTCCGGCTCCAGATACATCTGCTCAACCGTCTGAAGCCGGGCAGAAAGTAGAATCGAAGTGA 1116 0.4525 MGIYLSTPKTEKASEDGENDMLRFGLSSMQGWRATMEDAHAAHPYLDESTSYFGVYDGHGGKAVSKFCAKFLHQQVLRHEAYVAGDIATSLQKSFLRMDDMMRGQRGWRELAVLGDKIEKLSGMLEGFIWSPRSSEANERADEWAFEEGPHSDFSGPNSGSTACVAVIRGKKLVVANAGDSRCVLSRKGQAHNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDMEFKQNKYLPAEKQVVTADPDVTSVELCDDDEFLVIACDGIWDCMSSQQLVDFIHGQLKTENKLSAVCEKVFDRCLAPTAGGEGCDNMTMILIQFKNIPTSDASDIDQPESSAQLTPNPPAPDTSAQPSEAGQKVESK* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4970 371 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Tpr4g4970 371 Gene3D - 1 329 IPR036457 -
Tpr4g4970 371 SUPERFAMILY PP2C-like 3 331 IPR036457 -
Tpr4g4970 371 PANTHER PROTEIN PHOSPHATASE 2C 1 344 IPR015655 GO:0004722|GO:0006470
Tpr4g4970 371 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 344 - -
Tpr4g4970 371 SMART PP2C_4 13 326 IPR001932 -
Tpr4g4970 371 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Tpr4g4970 371 Pfam Protein phosphatase 2C 138 313 IPR001932 -
Tpr4g4970 371 MobiDBLite consensus disorder prediction 335 371 - -
Tpr4g4970 371 CDD PP2Cc 23 328 IPR001932 -
Tpr4g4970 371 ProSiteProfiles PPM-type phosphatase domain profile. 23 328 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4970 Tpr-Chr4 60395084 60402688 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4970 1 345 PP2C-type Phosphatase Gene Family AT2G25070 75.145 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4970 K17499 - gmx:100776787 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4970 4 60395084 60402688 Tpr4g4970 4 60395084 60402688 ECH