Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4945 ATGTCGGGGCAATCACAGCGTTTGAATGTGGTCCCCACAGTGACAATGCTTGGTGTTGTGAAAGCACGTTTGGTTGGTGCAACAAGAGGTCATGCACTTCTGAAGAAGAAAAGTGATGCTTTAACTGTTCAGTTTCGTCAGATCCTGAAAAAGATTGTTTCAACAAAGGAATCAATGGGTGATATCATGAAAACATCTTCATTTGCGTTAACTGAGGCTAAGTATGTAGCTGGTGATAACATCAAGCATGTTGTGCTTGAGAATGTTAAGGAAGCTTCACTTAGGGTGCGTTCTCGTACTGAGAATGTAGCTGGAGTGAAGCTTCCAAAATTTGAGTATTCTGCTGATGGTGAGGCATCGAAGAATGACCTTACCGGGTTGGCTAGAGGTGGTCAGCAGGTGCAGCAGTGTCGTGTTGCTTATATTAAGGCAATTGAGGTTCTTGTTGAGCTTGCTTCTCTTCAGACCTCTTTCCTTACCCTTGATGATGCTATTAAGACTACTAACCGTAGGGTTAATGCTCTTGAGAATGTTGTTAAGCCGCGGTTGGAGAATACTATTAGTTACATTAAGGGTGAGTTGGACGAGCTTGAGAGAGAGGATTTCTTTAGGTTGAAGAAGATTCAGGGTTATAAGAGGAGGGAAATTGAAAGGAAGATGGTGCTTGCTAGGGAACAACAGGCTGTTGAAAAGTTACAATTGCTGAAAGGGGTTTCGTATGAATCCACAAATTTGTTGGCTGGTACAACCGGTAAAGACGAGGATATCCTTTTCTAA 777 0.426 MSGQSQRLNVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMGDIMKTSSFALTEAKYVAGDNIKHVVLENVKEASLRVRSRTENVAGVKLPKFEYSADGEASKNDLTGLARGGQQVQQCRVAYIKAIEVLVELASLQTSFLTLDDAIKTTNRRVNALENVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKRREIERKMVLAREQQAVEKLQLLKGVSYESTNLLAGTTGKDEDILF* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4945 258 TIGRFAM V_ATPase_subD: V-type ATPase, D subunit 9 212 IPR002699 GO:0046961
Tpr4g4945 258 Pfam ATP synthase subunit D 18 209 IPR002699 GO:0046961
Tpr4g4945 258 Gene3D - 1 199 - -
Tpr4g4945 258 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 1 258 IPR002699 GO:0046961
Tpr4g4945 258 Coils Coil 180 200 - -
Tpr4g4945 258 PANTHER V-TYPE PROTON ATPASE SUBUNIT D-RELATED 1 258 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4945 1 258 Primary Pumps ATPases(2) AT3G58730 77.863 1.88e-148 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4945 K02149 - gmx:100801612 429.098