Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4943 ATGCCTGTCTATGATAACACTTCATTAGTCTCCGGTGCCGACCAAACTGTGTGTGTCACCGGTGCCGGTGGGTTCATAGCTTCTTGGCTTGTTAAACTTCTTTTGGAGAAAGGTTACACCGTTAGAGGAACCCTCCGAAACCCAGAGGATCCAAAGAATGGTCACTTGAAAGAGTTGGAAGGAGCAAAAGAGAGATTAACTTTGCATAAGGTTGATCTTCTTGATCTTAAATCTATCCAATCTGTTATTCATGGCTGCCATGGTGTATTCCACACAGCCTCCCCTGTTACTGACAACCCTGAAGAAATGTTGGAGCCAGCAATAAATGGAACTAAGAATGTGATTATAGCGTCCGCAGAAGCTAAAGTGAGACGTGTGGTGTTCACTTCATCAATTGGAACCGTCTATATGAACCCAAATACAAGTAGAGATGTTGTGGTTGATGAGTCGTACTGGAGTGATTTAGAACATTGCAAGAACACAAAGAATTGGTATTGTTATGGGAAGACAGTGGCAGAACAATCAGCATGGGATATAGCAAAAGAAAACCAAGTGGATTTGGTTGTAGTGAACCCGGTTTTGGTTCTTGGGCCATTACTACAATCAACAGTTAATGCAAGTACAATTCACATCCTCAAATATCTTACTGGTTCAGCCAAGACTTATGTGAATGCAACACAATCTTATGTTAGTGTTAAGGATGTTGCATTAGCACATGTTCTTGTTTATGAGACTAATTCTGCTTCTGGTAGATACATATGTTCTGATGCTTCCTTGCACCGTGGTGAAGTTGTTGAAATTTTGGCCAAGTATTTTCCTGAGTATCCACTTCCTACCAAGTGTTCAGATGAAAAGAATCCAAGGGTGAAACCATTCATATTCTCAAATCAAAAGCTGAAAAACTTAGGATTGGAATTGACTCCTGTGAAGCAATGTCTATATGAGACAGTTAGAAGTCTACAAGAGAAAGGACACCTTCCTATTCCCCAAATGAAAGAAGACTTTGTTTAA 1011 0.4036 MPVYDNTSLVSGADQTVCVTGAGGFIASWLVKLLLEKGYTVRGTLRNPEDPKNGHLKELEGAKERLTLHKVDLLDLKSIQSVIHGCHGVFHTASPVTDNPEEMLEPAINGTKNVIIASAEAKVRRVVFTSSIGTVYMNPNTSRDVVVDESYWSDLEHCKNTKNWYCYGKTVAEQSAWDIAKENQVDLVVVNPVLVLGPLLQSTVNASTIHILKYLTGSAKTYVNATQSYVSVKDVALAHVLVYETNSASGRYICSDASLHRGEVVEILAKYFPEYPLPTKCSDEKNPRVKPFIFSNQKLKNLGLELTPVKQCLYETVRSLQEKGHLPIPQMKEDFV* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4943 336 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 10 329 - -
Tpr4g4943 336 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 329 - -
Tpr4g4943 336 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 14 321 IPR036291 -
Tpr4g4943 336 Gene3D - 14 336 - -
Tpr4g4943 336 CDD FR_SDR_e 17 304 - -
Tpr4g4943 336 Pfam NAD dependent epimerase/dehydratase family 17 247 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4943 Tpr-Chr4 60174461 60177469 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4943 9 280 Monolignol Biosynthesis Gene Families AT1G80820 73.529 5.48e-140 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4943 K09753 - gmx:100811528 564.303