Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4933 ATGGATCAACAAAACAAACAAAGTTTCCAAAACCCCAAACACATAATTTTCGACAAATACGAAATGGGAAAAGTCTTGGGTCAAGGAAACTTAACAAACGAGAGTGTAGCCACCAAGGTGATAAAGAAAGAGAAGCTAAGAAAAGAGAGGTTAGTGAAGCAAATCAAGCGTGAAGTTTCGGTTATGCGTCTCGTTCGCCATCCTCATATAGTTGACCTCAAAGAAGTTATGGCAACAAAGGGAAAAATATTTCTAGTAATGGAATATGTAAAAGGAGGTGAACTTTTTGCCAAAGTTGCAAAAGGAAAATTGAAAGAAGATGTTGCTAGAAAATACTTTCAACAGCTCATCAGCGCCGTTGATTTTTGTCATAGTCGCGGTGTCACACACCGTGATTTGAAACCAGAGAATCTCCTCTTAGACGAAAACGAAGACCTAAAGGTCTCCGATTTTGGACTCTCAGCATTGCCAGAGCAACATCGAGAGGATGGGATGCTTTTAACTCCATGTGGGACCCCTGCTTATGTGGCACCCGAGGTTTTGAAGAAGAAAGGGTATGATGGTTCTAAGGCTGATCTATGGTCTTGTGGTGTTATCCTCTATGCCTTGGTTTGTGGATATCTTCCTTTTCAAGGTGAGAATGTTATGAGGATTTATAAAAAGGCTTTTAAAGGTGAATATGAATTTCCTGAATGGATTTCTCCGCAAGCTAAAATGTTAATTTCGAATCTTCTTGTCGCGGATCCTAAAAAAAGGTATTCAATTGTTGATATTATGAATGATCCTTGGTTTCGAATTGGGTTTGTTAGACCCATTGCGTTTTCTATGAATGGTTCGAGTATTGAAGATAACGACAAAGACATCAATATTGATTTCAATGAGGTTGGTGAAGATAATGTTGATGTTCCTGAATTGATAATGGTGAAGCCATCTCGTCCTTTTTATAATGCATTTGAGATAATTTCGTCGTTGTCACATGGTTTTGATCTTAGGAATTTGTTTGAGACGAGGAAAAAGTTGCCATCAATGTTTATATCAAAATTTTCGGCTTCAACAGTCTTGGAGAAACTTGAGGTGATGGCGAAGAAGTTGAACTTTAGGATGACAGGGAAGAAGGAGTTCGTGGTGAGATTTGAGGGGACAAAAGATGGGAGAAAGGGGAAGGTTGCGGTGACGATGGAGGTGTTTGGGGTGGCACCGGACGTGGCGGTGGTTGAGTTTTCTAAGTGTGGTGGAGACACATTGGAGTACGTTAAGTTGTGTGATGAACAATTAAGACCTTCACTCAAAGATATTGTTTGGAGTTGGCAAGGTGACAATCATAACGATAACAACTCTCAATAG 1344 0.3981 MDQQNKQSFQNPKHIIFDKYEMGKVLGQGNLTNESVATKVIKKEKLRKERLVKQIKREVSVMRLVRHPHIVDLKEVMATKGKIFLVMEYVKGGELFAKVAKGKLKEDVARKYFQQLISAVDFCHSRGVTHRDLKPENLLLDENEDLKVSDFGLSALPEQHREDGMLLTPCGTPAYVAPEVLKKKGYDGSKADLWSCGVILYALVCGYLPFQGENVMRIYKKAFKGEYEFPEWISPQAKMLISNLLVADPKKRYSIVDIMNDPWFRIGFVRPIAFSMNGSSIEDNDKDINIDFNEVGEDNVDVPELIMVKPSRPFYNAFEIISSLSHGFDLRNLFETRKKLPSMFISKFSASTVLEKLEVMAKKLNFRMTGKKEFVVRFEGTKDGRKGKVAVTMEVFGVAPDVAVVEFSKCGGDTLEYVKLCDEQLRPSLKDIVWSWQGDNHNDNNSQ* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4933 447 PANTHER CBL-INTERACTING PROTEIN KINASE 16 11 445 - -
Tpr4g4933 447 CDD CIPK_C 316 430 - -
Tpr4g4933 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Tpr4g4933 447 Pfam NAF domain 314 368 IPR004041 GO:0007165
Tpr4g4933 447 Gene3D Kinase associated domain 1, KA1 312 435 - -
Tpr4g4933 447 Gene3D Transferase(Phosphotransferase) domain 1 12 311 - -
Tpr4g4933 447 SMART serkin_6 20 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4933 447 ProSiteProfiles Protein kinase domain profile. 20 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4933 447 ProSiteProfiles NAF domain profile. 310 335 IPR018451 GO:0007165
Tpr4g4933 447 PANTHER - 11 445 - -
Tpr4g4933 447 SUPERFAMILY Protein kinase-like (PK-like) 16 325 IPR011009 -
Tpr4g4933 447 Pfam Protein kinase domain 24 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4933 Tpr-Chr4 60059753 60062371 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4933 10 444 CBL-interacting serine-threonine protein kinases AT5G25110 58.652 0.0 539
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Tpr4g4933 Pkinase 7.5e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4933 - - gmx:100812424 679.478