Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4930 ATGAATCTTATCAGATTTAACTTGAGTGGTTGCTCAATTTCATGTGCATTGAACATCTCAGCTCAAGTCCTGTTGGCTATACTTGATCGTCCATTGTCATATACTTCTCATGACTATGAAGAATACATAATGCATTCTTTCATGGTGACTTATGATGGTGTATTCCGCACAACCTCTCCTGTCACCGACAACCCTGATGAAATGTTGGAGCCAGCTGTGAATGGAACCAAGAATGTGATTATAGCTGCTGCTGCTGAAGCAAAAGTGAGACATGTCGTGTTCACTTCATTGATTGGAACATGGACCTAA 309 0.4078 MNLIRFNLSGCSISCALNISAQVLLAILDRPLSYTSHDYEEYIMHSFMVTYDGVFRTTSPVTDNPDEMLEPAVNGTKNVIIAAAAEAKVRHVVFTSLIGTWT* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4930 102 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 44 100 - -
Tpr4g4930 102 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 58 99 IPR036291 -
Tpr4g4930 102 Gene3D - 34 102 - -
Tpr4g4930 102 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 44 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4930 Tpr-Chr4 60038577 60039807 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4930 52 99 Monolignol Biosynthesis Gene Families AT1G80820 68.750 6.13e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4930 K09753 - csin:114284668 77.7962