Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4922 ATGGACAATGAGGAAATCCCATCAGTACCTTCTACCCCTGCAACACCAGGTACTCCTGGTGCTCCTCTTTTTGGTGCTTTCAAATCTGAGAGAAATGGAAATGCTTCTGTTGTTAGTAGAAGTAAGTCACTCCTCAAGAATTTGAAATGTTTTAGTGTTCAAGAATGGACTTTGGAAGATGGTGCCTTACCTAAAGTCTCTTGCTCTTTGCCTCCTCCTCCTGTCCCTCTTGCTAAAAAGGTTGGAGCAGAGTTTATAGGCACATTCATTCTAATGTTTGCTGGAATATCCACTGCAATTGTGAACCAAAAGATACATAACTCAGAGACACTAATTGGATGTGCTGGAGCTACTGGACTAGCTGTTATGATCATAATTTTATCAACTGGTCACATTTCTGGTGCTCATCTCAATCCTGCTGTCACCATTTCCTTTGCAGCATTAAAGCACTTCCCTTGGAAAAATGTGCCTTTATATATTGGTGCACAAGTTCTGGCATCAATATGTGCATCATATACTCTGAAAGGGGTTTTTCATCCATTCATGAATGGTGGAGTGACGGTTCCTTCAGTTGAATATGGCCAAGCTTTTGCTTTAGAGTTTATTATAAGCTTTAATCTCATGTTTGTTGTCACTGCTGTGGCTACCGACACAAGAGCTGTGGGTGAGCTTGCGGGAATCGCGGTGGGAGCCACTGTCATGCTCAACATACTCATAGCTGGGCCTGCAACTGGAGGTTCAATGAATCCAGTAAGAACATTAGGCCCAGCAATTGCTACAAACAACTACAAAGGCTTATGGATATATCTCGTAGCCCCTATTATTGGTGCACTAGCTGGGGCAGGTGCCTACACTGCCGTCAAACTCCATGATGAAGAATTTAACTCTGAGGTAAAAGACTCTTCTGCCCCTGGAAGCTTCAGAAGATGA 930 0.4312 MDNEEIPSVPSTPATPGTPGAPLFGAFKSERNGNASVVSRSKSLLKNLKCFSVQEWTLEDGALPKVSCSLPPPPVPLAKKVGAEFIGTFILMFAGISTAIVNQKIHNSETLIGCAGATGLAVMIIILSTGHISGAHLNPAVTISFAALKHFPWKNVPLYIGAQVLASICASYTLKGVFHPFMNGGVTVPSVEYGQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPATGGSMNPVRTLGPAIATNNYKGLWIYLVAPIIGALAGAGAYTAVKLHDEEFNSEVKDSSAPGSFRR* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4922 309 SUPERFAMILY Aquaporin-like 76 299 IPR023271 -
Tpr4g4922 309 Pfam Major intrinsic protein 77 284 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g4922 309 PANTHER AQUAPORIN NIP2-1 3 295 IPR034294 -
Tpr4g4922 309 PANTHER BNAA02G36290D PROTEIN 3 295 - -
Tpr4g4922 309 PRINTS Major intrinsic protein family signature 79 98 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g4922 309 PRINTS Major intrinsic protein family signature 118 142 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g4922 309 PRINTS Major intrinsic protein family signature 155 174 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g4922 309 PRINTS Major intrinsic protein family signature 199 217 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g4922 309 PRINTS Major intrinsic protein family signature 230 252 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g4922 309 PRINTS Major intrinsic protein family signature 267 287 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g4922 309 MobiDBLite consensus disorder prediction 1 22 - -
Tpr4g4922 309 CDD MIP 79 284 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g4922 309 ProSitePatterns MIP family signature. 136 144 IPR022357 -
Tpr4g4922 309 Gene3D Glycerol uptake facilitator protein. 74 302 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4922 Tpr-Chr4 59982279 59986266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4922 1 309 Major Intrinsic Protein MIP AT1G80760 72.669 2.72e-158 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4922 K09874 - gmx:100798410 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4922 4 59982279 59986266 Tpr4g4922 4 59982279 59986266 ECH