Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4901 ATGAAGGATAAAGATAAAGATAAGGAAAAGGAATCCGAAAAGAAAAAGTATCCTATCGGCGCCGAACATTACATTCTTTACGAAGAGATTGGTCAAGGCGTTAGTGCTTCCGTCTTCCGTGCTCAATGTGTTCCTTTCAACGAGATCATCGCTATCAAGATTCTCGACTTCGAACGTGACAACTGCGATCTGAATAATATATCTCGTGAAGCACAGACAATGGTTCTAGTGGACCACCCTAACGTGTTGAAATCACACTGTTCATTCGTTAGCGATCACAATCTATGGGTTGTGATGCCATTCATGTCTGGTGGTTCATGTCTTCACATATTGAAAGCTGCACATCCTGATGGATTTGAAGAGGTTGTTATTGCAACTGTACTTAGGGAGGTATTGAAGGGTTTAGAGTATCTTCATCATCACGGTCATATTCATCGTGACGTTAAGGCTGGTAATATTCTTATTGATTCTCGCGGTGCTGTTAAGCTAGGCGATTTCGGTGTTTCTGCTTGTCTTTTTGATTCCGGTGATCGCCAACGCTCTAGAAATACTTTTGTTGGAACACCTTGTTGGATGGCACCTGAGGTCATGGAGCAACTGCATGGTTATAACTTCAAAGCTGATATCTGGTCATTTGGCATAACTGCTTTGGAGCTTGCCCATGGCCATGCTCCTTTCTCAAAGTATCCACCCTTGAAGGTACTGCTTATGACCTTGCAAAATGCACCCCCAGGCCTTGACTATGAAAGGGACAAGAAGTTCTCCAAGTCTTTTAAGCAGATGATTGCTTGTTGTTTGGTAAAAGATCCTTCAAAAAGACCCTCAGCAAACAGGCTGTTAAAACATTCCTTCTTTAAGCAAGCTCGCTCCAGTGATTATATTAGCCGAACTCTATTGGAGGGGCTACCTGCTTTGGGTGATCGCATGGAGATTCTAAAGAGAAAAGAAGAAGATATGCGTGCACAAAAGAAAATGGCTGATGGGCAGATGGAGGAATTATCACAGAATGAATACAAACGAGGCATTAGTGGATGGAACTTCAACCTTGAAGATATGAAGGCTCAGGCTTCCTTGATCAACGATTTTGACGATGCTATATCTGATATTAATCATGTGGGAAGTTCAAGTTCCTTATCCAATCTTGATGCGCCGCAAGATAAGCAACAGCCAAGTTCAAGTCACTGCCGTTCTCAAACTGTTGACATGGAGGAAAATAATGAAACACATAACCAATTGGCTTCTGTTGTGGTAGTTGATTCCACAATAAATGATGCCAAGACTAAAGTTGAAAAATCTGATGATGATTTTAGCATCACCAGCTCAAGCCACGAACCACAAACTTCTTCCTGTCATGATGATCATGTGGACCAACGTTTAGGTGAAAAATCTGATGTTGAAAATGGCGTAAGATCCACGGAGGGCATGGCTATCCCTCCTCATCACAGAAGAGGATGTTCGTCAAGCATATTACCGGAAGTTACTCTTCCACCTATTCGAGCAGATTGTGAGAAGCTACAAAATCTTCCCTCAAACGTCTCAAGTGCCAATGCAACTTCAGTTCTACAAGCAGGAGAGGATGTGCTTACTGAACTTCCTTCTAGAGTCTCAAAATCATCAGCAGCTAATTCTGATGACACAGATGATAAAGCAAAGGTACCCGTTGTTCAACAGAGAGGACGTTTTAAAGTTACATCTGAGAATGTTGACCCGGAAAAGGTGGTTCCTTCTCCTATACTGCAAAAGAGTCACAGCATGCAGGTTGGTTGTTTAGAGGTTATAAGCCAGCATAATGCTACTCCTGTACATTCACCTTTACCGTTATTATCAACTATATCTGATTCTACGCCATCAAATATTTCTGGCTGTTCTCTGTTCCCCGTGTTGCACTCTGTGCTGCAGACAAATATTCTTCAGAGGGATACCATTCTAACTTTAATGAAGCTAATTACTGCGGGTGAATCTGCCGCTGATAGCACAAATACCCCAGCACAGATAGCAGCAACGGAGAAATCATTGCTTGAATCAGCTCACGAGAGGGAAAAGGAGTTACTTCATGAGATAACTGATCTGCAATGGAGGCTCATATGCACCCAGGAAGAGCTTCAAAAATTGAAAACAGATAATGCTCAGGTGTGA 2136 0.4232 MKDKDKDKEKESEKKKYPIGAEHYILYEEIGQGVSASVFRAQCVPFNEIIAIKILDFERDNCDLNNISREAQTMVLVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAHPDGFEEVVIATVLREVLKGLEYLHHHGHIHRDVKAGNILIDSRGAVKLGDFGVSACLFDSGDRQRSRNTFVGTPCWMAPEVMEQLHGYNFKADIWSFGITALELAHGHAPFSKYPPLKVLLMTLQNAPPGLDYERDKKFSKSFKQMIACCLVKDPSKRPSANRLLKHSFFKQARSSDYISRTLLEGLPALGDRMEILKRKEEDMRAQKKMADGQMEELSQNEYKRGISGWNFNLEDMKAQASLINDFDDAISDINHVGSSSSLSNLDAPQDKQQPSSSHCRSQTVDMEENNETHNQLASVVVVDSTINDAKTKVEKSDDDFSITSSSHEPQTSSCHDDHVDQRLGEKSDVENGVRSTEGMAIPPHHRRGCSSSILPEVTLPPIRADCEKLQNLPSNVSSANATSVLQAGEDVLTELPSRVSKSSAANSDDTDDKAKVPVVQQRGRFKVTSENVDPEKVVPSPILQKSHSMQVGCLEVISQHNATPVHSPLPLLSTISDSTPSNISGCSLFPVLHSVLQTNILQRDTILTLMKLITAGESAADSTNTPAQIAATEKSLLESAHEREKELLHEITDLQWRLICTQEELQKLKTDNAQV* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4901 711 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 13 710 - -
Tpr4g4901 711 Gene3D Phosphorylase Kinase; domain 1 12 101 - -
Tpr4g4901 711 CDD STKc_OSR1_SPAK 22 285 - -
Tpr4g4901 711 MobiDBLite consensus disorder prediction 531 551 - -
Tpr4g4901 711 ProSiteProfiles Protein kinase domain profile. 24 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4901 711 Gene3D Transferase(Phosphotransferase) domain 1 105 340 - -
Tpr4g4901 711 SMART serkin_6 24 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4901 711 MobiDBLite consensus disorder prediction 426 469 - -
Tpr4g4901 711 Coils Coil 312 336 - -
Tpr4g4901 711 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524
Tpr4g4901 711 MobiDBLite consensus disorder prediction 447 468 - -
Tpr4g4901 711 MobiDBLite consensus disorder prediction 376 410 - -
Tpr4g4901 711 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 13 710 - -
Tpr4g4901 711 Pfam Protein kinase domain 26 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4901 711 SUPERFAMILY Protein kinase-like (PK-like) 22 286 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4901 Tpr-Chr4 59796582 59804993 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4901 13 693 MAP Kinase Kinase Kinase Kinase AT1G79640 63.097 0.0 839
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Tpr4g4901 Pkinase 1.2e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4901 K08835 - gmx:100780339 1162.52