Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4886 ATGGATCCAAAGAAGTCTAACAAGATAACAGATATTGTTAGGCTTCAACAAATCCTCAAGAAGTGGAAAAAGGTTGCTACAAATGCTTCCAACAACAACAATAACTCGAGGAGTAGTAGTAGTAGTAGCGGTAGTAGCAACACTAGTAATAAAGGTATCAAGTTTTTGAAACGAACATTGTCATTCACTGATGTGTCTATTTCGAATGTGGACGCCGTTCCAAAAGGGTTCCTAGCTGTTTGTGTAGGGAAAGAGCTGAAGAGATTCATTATTCCGATGGATTACTTAAAACACCAAGCATTTGAGGTGTTGCTTCAAGAAGCTGAAGAGGAGTTTGGTTTCCAACAAGAGGGTGTGCTCAAAATTCCATGTCAAGTATCAATATTTGAGAAAATATTGAAGGTGGTGGAAGATAAAAAAGAAGCCTTAAACTTGCATGACTTTGGATTCAATGGAGAGAAGGACATGGTTAGTTGTGATGTTACCCCCACTCATCATGCTCAAGTTTGTAGATGA 516 0.3857 MDPKKSNKITDIVRLQQILKKWKKVATNASNNNNNSRSSSSSSGSSNTSNKGIKFLKRTLSFTDVSISNVDAVPKGFLAVCVGKELKRFIIPMDYLKHQAFEVLLQEAEEEFGFQQEGVLKIPCQVSIFEKILKVVEDKKEALNLHDFGFNGEKDMVSCDVTPTHHAQVCR* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4886 171 Pfam Auxin responsive protein 20 135 IPR003676 GO:0009733
Tpr4g4886 171 PANTHER OSJNBA0060N03.10 PROTEIN 5 160 - -
Tpr4g4886 171 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 160 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4886 Tpr-Chr4 59677865 59678697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4886 1 171 Calmodulin-binding Proteins AT2G24400 52.406 1.15e-54 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4886 K14488 - zju:107428189 215.312
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4886 4 59677865 59678697 Tpr4g4886 4 59677865 59678697 ECH