Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4882 ATGATGGATTCAGCAGACATGGAGTCTGGCTCTTACCATGACAGGCTAAGAACTTTCCCTAACATGCGTGCTAAACCTTACACCCCACTGGTATTTCGTATTCTACTGGGTATAAATGTTCGTGTCCTGTTCCTTCTTTTACTGCTCAGCTTTGGAGCTATCTTTTACATGGGTGCAAAAACATCTCCAATTATTGTTTTTGTCATCTCTATTTGTATTCTCAGCTTCTTCGTCGCCATATATCTTATGAAGTGGGTGCTCGCTAAAGATGAGGGTCCCCCTGAAATGGTTCAGATAGCCGATGCTATACGAGATGGAGCTGAAGGATTTATCAGGACACAGTATGGAACTATATCCAAGATGGCTATGTTGCTTGCTCTTGTCATTCTTTGCATATATTTGTTTCGCAGCACAACTCCTCAACAGGAAGCGTCTGGCGTAGGAAGGACAACAACTGCATACATCACTGTAGCTTCTTTCCTTTTAGGCGCCCTTTGTTCAGGTTTTGCCGGATACGTAGGGATGTGGGTGTCAGTTCGTGCCAATGTCAGAGTCTCTAGTGCCGCCAGACGGTCTTCAAGAGAGGCATTGCAGATAGCTACTCGTGCAGGTGGTTTATCAGCTCTCATTGTTGTTGGTATGGCTGTAATTGGTATAGCTGTCCTTTATGCCACATTTTATGTTTGGCTGGGAGTGGACACGCCAGGTTCAATGAAGGTTACTGATTTGCCTCTTCTTCTAGTTGGATATGGATTTGGTGCCTCCTTTGTCGCACTCTTTGCTCAGTTGGGTGGTGGTATATACACAAAAGCAGCTGATGTTGGGGCAGACCTTGTTGGAAAAGTAGAACAGGGAATACCTGAAGATGACCCTAGGAATCCTGCTGTTATTGCTGACCTGGTTGGAGACAATGTGGGAGATTGTGCTGCTAGAGGTGCTGATCTTTTTGAAAGTATCGCAGCTGAAATAATCAGTGCCATGATACTTGGGGGAACAATGGCACAACGATGTAAAATTGAAGATCCATCTGGCTTCATCTTGTTTCCTCTTGTTGTTCACTCATTTGATCTGGTAGTTTCATCAGTGGGAATATTTTCTATTCGGGGTACACGCGAATCCGGTGTATTGTCTCCTATAGAAGATCCTATGGCAATTCTTCAGAAAGGATACTCTGTTACAATAGTTTTAGCTGTTCTGGCATTTGGTCTGTCTACCCGGTGGTTACTTTATGTTGAGCAAGCACCTTCAGCATGGTTCAATTTTGCATTGTGCGGGTTGATTGGTATTATTACAGCCTACATTTTTGTCTGGATTACCAAGTATTATACTGATTACAAGCATGAGCCTGTGCGCACATTAGCCCTTTCTAGCTCTACTGGCCATGGGACCAACATAATTGCTGGGGTCAGTTTGGGGCTGGAATCTACAGGTCTTCCAGTCCTTGTCATCAGTGCGGCAATTGTCTCAGCTTACTGGTTGGGCCAGACTGCTGGACTGATAGATGAAACTGGAAACCCAACTGGTGGGCTGTTTGGCACAGCAGTAGCAACAATGGGAATGCTTAGCACTGCTGCCTATATTCTTACCATGGACATGTTTGGCCCAATAGCTGATAATGCTGGAGGAATTGTAGAAATGAGTCAACAGCCCGAAAGTGTTCGAGAAATCACTGATGTCCTTGATGCTGTGGGCAACACAACCAAAGCCACCACCAAAGGATTTGCCATCGGTTCTGCTGCGCTTGCATCTTTCCTTCTGTTTAGTGCTTATATGGATGAAGTTTCTTCATTTTCTCGTGAACCTTTTAAACAGGTTGATATTGCAATTCCTGAAGTTTTTGTTGGTGGGCTGCTGGGTGCCATGCTTATATTTGTCTTTAGTGCTTGGGCCTGTGCTGCTGTTGGCCGAACTGCACAAGAGGTTGTTAATGAAGTAAGGAGGCAGTTCATTGAGAGGCCCGGTATAATGGATTACAAGGAGAAACCGGATTATGCTCGCTGTGTTGCAATTGTAGCATCTGCATCATTAAGAGAGATGATAAAACCCGGTGCACTGGCAATCATTTCACCTATTGTAGTTGGTTTTGCATTCCGAATTTTGGGCTACTATACAGGGCAACCCTTACTCGGGGCTAAAGTTGTGGCTGCTTTGCTGATGTTTGCAACAGTGTCTGGTATTCTAATGGCACTTTTTATGAACACGGCTGGTGGTGCCTGGGATAATGCAAAGAAGTACATAGAGACTGGAGCTCTTGGAGGCAAGGGAAGTGATGCTCACAAAGCAGCTATAACAGGAGATACAGTGGGAGACCCATTCAAAGACACAGCTGGGCCTTCACTTCATGTCCTTATAAAGATGCTCTCAACGATTACATTGGTAATGGCTCCCATCTTCCTGTGA 2400 0.4487 MMDSADMESGSYHDRLRTFPNMRAKPYTPLVFRILLGINVRVLFLLLLLSFGAIFYMGAKTSPIIVFVISICILSFFVAIYLMKWVLAKDEGPPEMVQIADAIRDGAEGFIRTQYGTISKMAMLLALVILCIYLFRSTTPQQEASGVGRTTTAYITVASFLLGALCSGFAGYVGMWVSVRANVRVSSAARRSSREALQIATRAGGLSALIVVGMAVIGIAVLYATFYVWLGVDTPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQRCKIEDPSGFILFPLVVHSFDLVVSSVGIFSIRGTRESGVLSPIEDPMAILQKGYSVTIVLAVLAFGLSTRWLLYVEQAPSAWFNFALCGLIGIITAYIFVWITKYYTDYKHEPVRTLALSSSTGHGTNIIAGVSLGLESTGLPVLVISAAIVSAYWLGQTAGLIDETGNPTGGLFGTAVATMGMLSTAAYILTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSSFSREPFKQVDIAIPEVFVGGLLGAMLIFVFSAWACAAVGRTAQEVVNEVRRQFIERPGIMDYKEKPDYARCVAIVASASLREMIKPGALAIISPIVVGFAFRILGYYTGQPLLGAKVVAALLMFATVSGILMALFMNTAGGAWDNAKKYIETGALGGKGSDAHKAAITGDTVGDPFKDTAGPSLHVLIKMLSTITLVMAPIFL* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4882 799 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 67 798 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Tpr4g4882 799 PIRSF H+-PPtase 57 799 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Tpr4g4882 799 Pfam Inorganic H+ pyrophosphatase 74 794 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Tpr4g4882 799 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 62 799 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Tpr4g4882 799 PANTHER INORGANIC DIPHOSPHATASE-RELATED 18 799 - -
Tpr4g4882 799 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 18 799 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4882 Tpr-Chr4 59652672 59659491 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4882 1 799 Primary Pumps ATPases AT1G16780 86.284 0.0 1428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4882 K23025 - gmx:100787805 1380.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4882 4 59652672 59659491 Tpr4g4882 4 59652672 59659491 ECH