Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4876 ATGCATCACAACCACAACCTCCAATGGTTGTGGATTATTGCTTTGGTCTCAACCACAACAGTTCAATGCAAAACCTCCTCCCAGGATGTTGCAGCCCTTAATGTGATGTACACCAGCTTGAATTCTCCTTCCCAACTCAGTGACTGGAAATCAAGCGGAGGTGATCCTTGTGGTGACTCCTGGGAAGGAATCAAATGTTCTGGCTCATCTGTCACCGAAATAGATTTATCTGATTCCAGACTTACCGGATCAATGGGCTACCAGTTGTCAAGCTTAACATCAGTTACCTACTTTGATTTGAGCAACAACAACCTCAACGGTCAAATACCGTATCAACTCCCTCCAAATGCTCGTACCATAGATCTTTCTAAGAATGAATTCAGTGGAAGTATACCTTATTCCATTGGTCAGATGAAAGACCTCAACTCTCTAAATCTTGCACATAATCAGCTCAATAACGAGCTGGGAGATATGTTTAAGAGCCTCACTAAACTCAAACAATTGGATGTATCATTCAATTCACTATCAGGAAACCTGCCTCAGAGTCTTGAATCACTCTCAAGCCTCGAGAAGATACATCTGCAAAACAATAAATTCTCTGGTTCAATAAATGTCCTTGCCAACCTTCCACTTGATGATGTAAATGTTGAGAACAACAAATTTACTGGTTGGATTCCTGAGGAGTTAAAGGATATAGATAACTTGAAAACTGGAGGAAACTCTTGGTCAACTGGGCCAGCACCACCTCCTCCTCCCGGTACACCTCATATCAAGCATTCCGAGAAAACTGATGGAAAGTCTATTGTAACTGGAGTGGTTATAGCCGGTGTAACTTTTGGTATCCTGGCCATAATCATAATCTTTGTTGCTCTTTCTAAAAAAAGGCCATCTTTACCTTCTTCACGTTTTATTGATGAAGAGAGACTTAGCAAGAACAGATCTTTTACAACGTTTTCATCGCAGGAGTTGTCTAAAGATTCAGGATTTAAATCAGTGGATTCCACTTCAATTGACATAAAGGCTTTACAAAAAATTCCATCAATTGGTGTTAGGTCATCAGTCTCTGATTGTGTACAAGCCTTTAATGACAATGAGTTTGTAAAGCGTCTAAATTCTAGAAGAAGCACATCAATCCGATGTACTCCCTTTTCATTTGGAGAGTTGCAAATTGGTACTGCTAACTTTGCTTCAGGTCGACTTCTTGGTGAAGGATCCATTGGACCTGTTTATCGTGCCAAATATGCTGACGGAAAGGTATTCGCTGTAAAAAAAATCAACCCTTCACTTTTAGATGGGGGTTCTCCTGAGGAATTCTCTCAGATTGTAACAAGTATCTGCAAACTTCGTCATCCAAATATTGCTGAGGTTGTTGGTTATTGTTCAGAACAGGAGCACATGTTAATATATGATTATTTCAGAAATGGTTCTCTACACGATTTTTTACACTTATCGGATGACTTCAGCAAACCACTAACTTGGAACACCAGAGTCAGAATTGCATTGGGAACTGCTCGGGCTGTTGAGTACCTACATGAAATTTGTTCTCCACCTTTAGTTCACAAGAATATCAAATCCGCCAATATTTTGCTTGACACAGATTTGAGTCCCCGTCTCTCAGACTACGGTTTGGCATCCTTTCACCAGCGTACTAGCCAAAATCTCGGGGCAGGATATAATGCACCAGAATGCACAAAACCATCAGCCTATACCTTGAAGAGCGATGTATACAGTTTTGGTGTAGTGATGCTCGAACTTTTGACAGGTCGAAAGCCTCTAGATAGTTCAAAGCCAAAAGCAGAGCAATGTCTCGTTCGTTGGGCTACCCCGCAGCTTCATGACATAAATGCTGTGGAAAAAATGGTAGACCCTGCCTTGCGGGGACTTTACCCTCCTAAATCACTCTTCGGATTTGCTGACATCATCGCCCTTTGTGTTCAGTCTGAGCCCGAAGTTCGGCCACCTGCATCAGAGGTGGTTCAGGCATTGGTGCGATTAGTTCAGGGTTCAAGTATAAAAATGAGAGAGGATCTTGGTGCTGGACAGATGGATGATTATGATGATTGA 2064 0.4172 MHHNHNLQWLWIIALVSTTTVQCKTSSQDVAALNVMYTSLNSPSQLSDWKSSGGDPCGDSWEGIKCSGSSVTEIDLSDSRLTGSMGYQLSSLTSVTYFDLSNNNLNGQIPYQLPPNARTIDLSKNEFSGSIPYSIGQMKDLNSLNLAHNQLNNELGDMFKSLTKLKQLDVSFNSLSGNLPQSLESLSSLEKIHLQNNKFSGSINVLANLPLDDVNVENNKFTGWIPEELKDIDNLKTGGNSWSTGPAPPPPPGTPHIKHSEKTDGKSIVTGVVIAGVTFGILAIIIIFVALSKKRPSLPSSRFIDEERLSKNRSFTTFSSQELSKDSGFKSVDSTSIDIKALQKIPSIGVRSSVSDCVQAFNDNEFVKRLNSRRSTSIRCTPFSFGELQIGTANFASGRLLGEGSIGPVYRAKYADGKVFAVKKINPSLLDGGSPEEFSQIVTSICKLRHPNIAEVVGYCSEQEHMLIYDYFRNGSLHDFLHLSDDFSKPLTWNTRVRIALGTARAVEYLHEICSPPLVHKNIKSANILLDTDLSPRLSDYGLASFHQRTSQNLGAGYNAPECTKPSAYTLKSDVYSFGVVMLELLTGRKPLDSSKPKAEQCLVRWATPQLHDINAVEKMVDPALRGLYPPKSLFGFADIIALCVQSEPEVRPPASEVVQALVRLVQGSSIKMREDLGAGQMDDYDD* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4876 687 Gene3D Transferase(Phosphotransferase) domain 1 472 680 - -
Tpr4g4876 687 SUPERFAMILY L domain-like 25 236 - -
Tpr4g4876 687 ProSiteProfiles Protein kinase domain profile. 395 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4876 687 MobiDBLite consensus disorder prediction 242 262 - -
Tpr4g4876 687 Gene3D Phosphorylase Kinase; domain 1 357 471 - -
Tpr4g4876 687 Gene3D Ribonuclease Inhibitor 23 261 IPR032675 -
Tpr4g4876 687 SUPERFAMILY Protein kinase-like (PK-like) 373 662 IPR011009 -
Tpr4g4876 687 Pfam Protein tyrosine and serine/threonine kinase 398 662 IPR001245 GO:0004672|GO:0006468
Tpr4g4876 687 PANTHER OS01G0253100 PROTEIN 19 681 IPR045271 GO:0004714|GO:0006468
Tpr4g4876 687 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 5 19 681 - -
Tpr4g4876 687 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4876 Tpr-Chr4 59600192 59607436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4876 5 686 Strubbelig Receptor Gene Family AT1G78980 61.207 0.0 842
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Tpr4g4876 PK_Tyr_Ser-Thr 8.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4876 - - mtr:MTR_4g005130 1120.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4876 4 59600192 59607436 Tpr4g4876 4 59600192 59607436 ECH