Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4875 ATGAAACTACAGGCTCATATTCCAGGGCAGATATCCGGACAGGTACCCAATCAAGCAGGGTCTCAGTTGTCTGGAATGGCCCAACTGAATGGGAATGCCCTGCCATCACAGATGCCATCTTTAGGTGGTGTATCACGATCAGCAATTAATATGGATCCCGAACTTCGTAGAGCACGCGCATTTATTCAAGAGAAAATCTGTGAGATATTATTGCAACGTCAACTGCCACCAACAACTGAAATGCAGAGAATGAAGATTAAGGATCTTTCAAAACGCCTGGAGGAGTGCATGTTAAAAGCTGCTATTACTAAGGAGGACTACATGAACTTGAATACACTAGAGAGTCGTTTATCTAATTTCCTCCGAAGAGCTCAAAGCCAACCGTATCCCCAGCTTGTTAGCTCTTCTCCCATTGGTACAATGATACCAACCCCTGGTATGTCGCATGGTCCAAATTCAAGCATGGTGGTTGCATCTTCTATAGATGCCTCAATGATTTCTTCCAGTGGGTGTAATAATAGCATAGTATCAACATCTTTCAATAGTGTAAATATGTTACCAGCTGGTGGAATGCTTGGCAGTTCCTTAAACAGATCTGATGGTTTGTCAAATGGATATCAGCAGTCCTCTACCAGCTTCTCTGTTGGCCCAGGGGGGAACATGTCGTCAATGGGTGTGCCGAGAAATTCAAGCCAGATGATTCCTACACCGGGATTTACAGTCAACAGCAACCACTCGCATATGAATATAGATTCATCTACTAATGGTAGTGTCTTTTCCAGTGCAGACTCTACTATGGTACCACAGTCACAGCTGGAGCAGCAGAAACAGCACGCTGGTGACCAAAGTCATGTATTGTCGAACCTTGGCAGCCAAATGAGTAGTGGAATGAGATCTGGTTTGCTACAAAAACAATTTACAAACTCAAACGGTGCTATAAATAGTGGGATAGGTTTGATTGGTAACAATATCCAACTTGTAAATGAACCAGGCACTTCCGATGGCTATGCCTCAAACTATGCCAATTCCCCTAAACACATACATCAGCACTTTGACCAAAATCAGAAACCAGTAATGCAGGGTGATGGATATGGATTGAATAATGTTGACCCTTTTGCTTCTGGAAACTTTTATGCATCTGCAACATCTTCTGGGTCTATGACGAATACTCAGAACACAAATTCAGTAAAATTGCCATCAATACCCAAAACCAGCTCATTGATCAGTGGTCACTCGAATTTGCATGGTATGCAGCAGGCTGCTCATATAAAGTCTCAAGCAATCAATCAATTGGAAAAATTGCATTTTCAATCTTCATCAACTTCAAGGGATGCTCTTCTGCATTCTCAACAGCAGTATCCACAAAGGCCCCAGCAATTTCAACAGCCAGAGCAGTATTCACAATCACAGCAACAATTTCAATTGAAACTACATAGTCAACAGCCTCAGCATTTTGTCAACGATGATGCTTTCAATCAGTCTCAGTTGTCTTCCAATCTAGAAAACCAAGTGAAGTCAGAGCCTGGAATTGAGCACCATAAAGACCTTCTCAATTCTCATGTTCCTGAACAGTTCCATATGCCTGAGATGCAGAATCAGTTCCAGCAAAATTCATCTGAAGATTGCTCTAGGAGTGCTCAATACATTTCCTTTCCATCTGGCCAGCATGATTTATCCTCATCAGCACCTCAAAATTCGCAACAAATGTTGCATCCACACCAATTGGTTGCAGAATCTCAAAATAAGTTCAGCTGCCTTACAGTTGGGGCACAATCCAATTCCAAATCAGTAGTTCTAAACCAATGGCCTGACTCACAAGATGGGAACCACATGTCTAACAATATTTCACATGACCAGCATCTCCATGTGGATTTTCATCAAAGAATATCAGGGAAGGATGAAGCCCATTGCAATAATTTATCATCAGATGTATCTATGGGCCAAGCTGTTGCTTCTAGAGGCGCAACTGAGCCACTAGACCCAGGAAGTGCTACCAAACAGGCACACAGGCATCAACAAAGGTGGCTTTTATTTCTACTTCATGCTCGGAAATGTGCTGCTCCTGAAGGGCGATGCCAAGAACGTTCTTGTTCTAGTGCACGGAAGTTATGTATGCACATTGATGGATGCACCCTGCGTCATTGTCCAGTCCCACGTTGTCATCATACCAGGGTATTGCTTCATCATTTCATACACTGCAAGGATCCGTGCTGCCCTGTTTGTGTTTTTGTAAAAAATTACCGGCGTGCATTTCAACTTAAGCCTCAGATTCAGCCAGAATCTGAATCAAGTTTGCCAAGTGTGGTAAATGGATCCTGTAAATCTTACAATATTACAACTACGTCATCTAGATTGATCTCAAAACCTACATTAGTTGTGGAAACTTCAGAAGACCTGCACCCATCTCTAAAACGCATTAAGATTGAGCATTGCACCCAGTCTGTTAATCTTGAAAATGACAATTCTGCATCATCTGTTTCTGCAAATTGTGAATCTCTTGTTTCCAGGGATGCTCAGTCCCAAACTTATCCCAATGCAGAGAAGTCCATCTCAATTAAATCTGAGCTTACAGAAGTAAAAGCAGAAGTTTTGGCTCATGCTAAGCTTAGCAATATGAAGATGGATTCCAATAATGCAGATGATAAAATTCTTGATGGTGAGCCTGTCAAGCATGATGATCCTGGTAATTCAGCTAGGCCAGAAAATATAAAAACTGAAAAAGAAATTGGACAAGATAAGCAAGAAAATGCAATGCAGCAGAGTGAAAATGCAGCTGGAACAAAGTCTGGTAAGCCAAAAATAAAGGGGGTCTCTTTAACCGAATTATTTACTCCAGAGCAAGTAAGGGAACATATTACTGGTCTCAGGCAATGGGTTGGCCAAAGCAAATCAAAGGCAGAGAAGAATCAAGCAATGGAGCACGCAATGAGCGAGAATTCCTGTCAATTATGTGCTGTAGAGAAGCTTACATTTGAACCACCACCTATTTATTGCACAACATGTGGGGTTCGCATCAAAAGAAACAATATGTACTATACCATGGGTACTGGTGATACTCGGCATTATTTTTGTATCCCATGCTATAATGATGCTCGTACAGAACACATTGTTGTTGATGGGACTCCCATTGCTAAATCAAGATTGGAAAAGAAGAAGAATGACGAGGAAACCGAGGAATGGTGGGTTCAATGTGATAAATGTGAAGCTTGGCAGCACCAAATATGTGCCTTGTTTAATGGTAGAAGAAATGATGGTGGACAAGCTGAATACACTTGCCCTAACTGCTACATTGAAGAGGTAGAACGAGGAGAGCGCATGCCATTACCCCAAAGTGCTGTTCTTGGAGCAAAGGATTTACCGAGAACTATTCTTAGTGACCATATAGAACAACGATTATTTAAGCGGCTAAAGCACGAAAGACAAGAGAGAGCAAGGTTTCATGGGAAAACCTATGACGAGGTGCCTGGAGCTGATTCCCTTGTTGTAAGAGTCGTGTCATCTGTTGACAAGAAGTTAGAAGTGAAACAGCGTTTTTTGGAGATTTTTCAGGAAGAAAATTACCCGACAGAGTTCCCATATAAATCAAAGGTAGTTTTGCTGTTTCAAAAGATTGAAGGTGTGGAAGTATGCCTATTTGGCATGTATGTTCAAGAATTTGGAGCTGAATGTCAATTTCCCAATCAGCGCCGAGTTTATCTTTCATATTTGGACTCTGTGAAGTATTTCAGGCCTGAGGTTAAATCAGTAACTGGAGAGGCTCTTCGAACATTTGTTTACCATGAAATTCTGATTGGATACCTTGAATATTGTAAGTTACGTGGTTTTACCAGCTGCTATATTTGGGCTTGTCCTCCGTTAAAAGGCGAAGATTATATTTTATATTGCCATCCAGAAATTCAGAAAACACCAAAATCTGACAAGCTTCGTGAATGGTATCTAGCCATGTTAAGAAAAGCTGCAAAGGAGAATGTTGTGGTCGATATCACCAACTTATATGATCATTTCTTCACATCTACTGGTGAATGTAGGGCTAAGGTTACAGCTGCAAGACTCCCATATTTTGATGGTGACTACTGGCCTGGGGCTGCAGAAGATTTGATTTATCAGCTACGCCAAGAGGAAGATGGAAGAAAGCAAAATAAAAAAGGAACGACTAAAAAGACTATCACAAAAAGGGCTCTAAAAGCATCTGGTCAGTCAGATCTTTCAGGAAATGCATCGAAAGATCTGCTCCTCATGCACAAACTTGGTGAAACCATTTCCCCAATGAAGGAAGATTTTATCATGGTTCATTTGCAGCATGCATGTGCTCACTGCTGTATTCTAATGGTGTGTGGCAACCGTTGGGTCTGTAATCAGTGCAGGAATTTTCAGATTTGTGATAAGTGTTATGAAGCAGAGCTAAAGCGTGAAGAGAGAGAAAGACATCCTGTTAATCAGAGGGAAAAGCACACCTTTTCTCCAGTTCAAATTACTGATGTACCATCTGATACAAAGGATAAAGATGATATTCTTGAGAGTGAATTCTTTGACACTAGACAGGCGTTTCTGAGTCTCTGCCAGGGAAATCATTACCAGTATGATACACTAAGGAGGGCCAAGCATTCCTCAATGATGGTCCTATATCATCTTCATAATCCAACTGCTCCTGCATTTGTGATCACTTGTAATACATGCTATCTTGACATTGAAACTGGTCAAGGTTGGCATTGTGAAGTTTGCCCAGAGTACGATGTATGCAATTCTTGTTATCAAAAAGGAGGCATTGATCATCCTCATAAATTGACAAATCATCCGTCAATGGCGGATCGTGATGCTCAGAACAAAGAAGCAAGGCAGCTTCGAGTATTGCAGCTAAGGAAAATGCTCGATCTTCTAGTGCATGCATCCCAATGTCGTTCTGCACATTGCCAATATCCTAATTGTCGCAAAGTGAAGGGACTCTTCCGCCATGGTATGCACTGCAAAACACGTGCTTCTGGAGGCTGTGTTCTTTGTAAGAAAATGTGGTATTTGCTTCAACTTCATGCTCGTGCATGCAAAGAATCCGAATGCCATGTGCCACGATGCAGAGATTTAAAAGAACATCTAAGGAGGCTGCAGCAGCAGTCTGATTCACGGCGTAGAGCTGCTGTTATGGAAATGATGAGACAGAGAGCTGCAGAAGTTGCTAATAATGCTGGATGA 5187 0.4164 MKLQAHIPGQISGQVPNQAGSQLSGMAQLNGNALPSQMPSLGGVSRSAINMDPELRRARAFIQEKICEILLQRQLPPTTEMQRMKIKDLSKRLEECMLKAAITKEDYMNLNTLESRLSNFLRRAQSQPYPQLVSSSPIGTMIPTPGMSHGPNSSMVVASSIDASMISSSGCNNSIVSTSFNSVNMLPAGGMLGSSLNRSDGLSNGYQQSSTSFSVGPGGNMSSMGVPRNSSQMIPTPGFTVNSNHSHMNIDSSTNGSVFSSADSTMVPQSQLEQQKQHAGDQSHVLSNLGSQMSSGMRSGLLQKQFTNSNGAINSGIGLIGNNIQLVNEPGTSDGYASNYANSPKHIHQHFDQNQKPVMQGDGYGLNNVDPFASGNFYASATSSGSMTNTQNTNSVKLPSIPKTSSLISGHSNLHGMQQAAHIKSQAINQLEKLHFQSSSTSRDALLHSQQQYPQRPQQFQQPEQYSQSQQQFQLKLHSQQPQHFVNDDAFNQSQLSSNLENQVKSEPGIEHHKDLLNSHVPEQFHMPEMQNQFQQNSSEDCSRSAQYISFPSGQHDLSSSAPQNSQQMLHPHQLVAESQNKFSCLTVGAQSNSKSVVLNQWPDSQDGNHMSNNISHDQHLHVDFHQRISGKDEAHCNNLSSDVSMGQAVASRGATEPLDPGSATKQAHRHQQRWLLFLLHARKCAAPEGRCQERSCSSARKLCMHIDGCTLRHCPVPRCHHTRVLLHHFIHCKDPCCPVCVFVKNYRRAFQLKPQIQPESESSLPSVVNGSCKSYNITTTSSRLISKPTLVVETSEDLHPSLKRIKIEHCTQSVNLENDNSASSVSANCESLVSRDAQSQTYPNAEKSISIKSELTEVKAEVLAHAKLSNMKMDSNNADDKILDGEPVKHDDPGNSARPENIKTEKEIGQDKQENAMQQSENAAGTKSGKPKIKGVSLTELFTPEQVREHITGLRQWVGQSKSKAEKNQAMEHAMSENSCQLCAVEKLTFEPPPIYCTTCGVRIKRNNMYYTMGTGDTRHYFCIPCYNDARTEHIVVDGTPIAKSRLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIEEVERGERMPLPQSAVLGAKDLPRTILSDHIEQRLFKRLKHERQERARFHGKTYDEVPGADSLVVRVVSSVDKKLEVKQRFLEIFQEENYPTEFPYKSKVVLLFQKIEGVEVCLFGMYVQEFGAECQFPNQRRVYLSYLDSVKYFRPEVKSVTGEALRTFVYHEILIGYLEYCKLRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLAMLRKAAKENVVVDITNLYDHFFTSTGECRAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKTITKRALKASGQSDLSGNASKDLLLMHKLGETISPMKEDFIMVHLQHACAHCCILMVCGNRWVCNQCRNFQICDKCYEAELKREERERHPVNQREKHTFSPVQITDVPSDTKDKDDILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVITCNTCYLDIETGQGWHCEVCPEYDVCNSCYQKGGIDHPHKLTNHPSMADRDAQNKEARQLRVLQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGMHCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVANNAG* 1729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4875 1728 MobiDBLite consensus disorder prediction 253 281 - -
Tpr4g4875 1728 Gene3D TAZ domain 1607 1724 IPR035898 -
Tpr4g4875 1728 ProSiteProfiles Zinc finger ZZ-type profile. 1431 1494 IPR000433 GO:0008270
Tpr4g4875 1728 PANTHER HISTONE ACETYLTRANSFERASE HAC12 123 1726 - -
Tpr4g4875 1728 CDD PHD_HAC_like 1023 1095 - -
Tpr4g4875 1728 ProSitePatterns Zinc finger PHD-type signature. 1024 1095 IPR019786 -
Tpr4g4875 1728 PANTHER CBP/P300-RELATED 123 1726 IPR013178 GO:0004402|GO:0006355|GO:0016573
Tpr4g4875 1728 MobiDBLite consensus disorder prediction 878 913 - -
Tpr4g4875 1728 ProSitePatterns Zinc finger ZZ-type signature. 1556 1583 IPR000433 GO:0008270
Tpr4g4875 1728 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1048 1096 IPR013083 -
Tpr4g4875 1728 Pfam Zinc finger, ZZ type 1553 1594 IPR000433 GO:0008270
Tpr4g4875 1728 SUPERFAMILY TAZ domain 666 748 IPR035898 -
Tpr4g4875 1728 MobiDBLite consensus disorder prediction 383 418 - -
Tpr4g4875 1728 MobiDBLite consensus disorder prediction 200 219 - -
Tpr4g4875 1728 SMART KAT11_2 1146 1443 IPR013178 GO:0004402|GO:0006355|GO:0016573
Tpr4g4875 1728 SUPERFAMILY FYVE/PHD zinc finger 1057 1097 IPR011011 -
Tpr4g4875 1728 Gene3D - 1427 1487 IPR043145 -
Tpr4g4875 1728 Pfam TAZ zinc finger 1620 1690 IPR000197 -
Tpr4g4875 1728 Pfam TAZ zinc finger 673 741 IPR000197 -
Tpr4g4875 1728 SMART zz_5 1550 1595 IPR000433 GO:0008270
Tpr4g4875 1728 SMART zz_5 1430 1474 IPR000433 GO:0008270
Tpr4g4875 1728 ProSiteProfiles Zinc finger TAZ-type profile. 1610 1693 IPR000197 -
Tpr4g4875 1728 SUPERFAMILY RING/U-box 1411 1489 - -
Tpr4g4875 1728 SMART TAZ_2 1613 1691 IPR000197 -
Tpr4g4875 1728 SMART TAZ_2 667 744 IPR000197 -
Tpr4g4875 1728 MobiDBLite consensus disorder prediction 1377 1401 - -
Tpr4g4875 1728 MobiDBLite consensus disorder prediction 875 933 - -
Tpr4g4875 1728 ProSiteProfiles Zinc finger ZZ-type profile. 1551 1603 IPR000433 GO:0008270
Tpr4g4875 1728 SUPERFAMILY RING/U-box 1532 1598 - -
Tpr4g4875 1728 Gene3D TAZ domain 660 749 IPR035898 -
Tpr4g4875 1728 ProSiteProfiles Zinc finger TAZ-type profile. 663 744 IPR000197 -
Tpr4g4875 1728 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1113 1549 IPR031162 GO:0004402
Tpr4g4875 1728 Pfam Histone acetylation protein 1154 1373 IPR013178 GO:0004402|GO:0006355|GO:0016573
Tpr4g4875 1728 SUPERFAMILY TAZ domain 1612 1695 IPR035898 -
Tpr4g4875 1728 Pfam PHD-finger 1054 1096 IPR019787 -
Tpr4g4875 1728 Gene3D - 1549 1601 IPR043145 -
Tpr4g4875 1728 MobiDBLite consensus disorder prediction 439 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4875 Tpr-Chr4 59581712 59595995 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Tpr4g4875 HAT_KAT11 7e-31 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4875 K04498 - gmx:100809207 2901.69