Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4861 ATGGAAAATGGAAATGTTGGTACTAATGTTATGAGAAATCCAGAAGTAAGTAATTCTCTACCTCTTGCGCATCGTGGAAATATAGCTTATTGGGAATTTAAGGTGCTTGATTCTACTATAGAATTGAACGGTTTTTTGGAAATTCCTAAAGAATACCACTACATATTTGTAGATCAAAGTCAAAATGAGATTATTTTGGCTGATAATGATTCTAAACAAACCTATGTCTGTGATATTATTTTTACGCATCAAACCAATTTGGAAATAGTAATAGGAAGAGGTTGGTTGAATTATGTTAGAGACGTTAATTTGAAGGCTGGAGATACATTGGTGTTTCTCCTATATGAAAATCATCCGGAAAAGCTTCATGTGTGCGTTGTTGATAGAGTTTGA 393 0.3308 MENGNVGTNVMRNPEVSNSLPLAHRGNIAYWEFKVLDSTIELNGFLEIPKEYHYIFVDQSQNEIILADNDSKQTYVCDIIFTHQTNLEIVIGRGWLNYVRDVNLKAGDTLVFLLYENHPEKLHVCVVDRV* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4861 130 ProSiteProfiles B3 DNA-binding domain profile. 31 130 IPR003340 GO:0003677
Tpr4g4861 130 CDD B3_DNA 33 128 IPR003340 GO:0003677
Tpr4g4861 130 Gene3D - 11 130 IPR015300 -
Tpr4g4861 130 SUPERFAMILY DNA-binding pseudobarrel domain 29 127 IPR015300 -
Tpr4g4861 130 Pfam B3 DNA binding domain 37 129 IPR003340 GO:0003677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Tpr4g4861 B3 1.4e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4861 - K09287 mtr:MTR_2g062330 64.6994