Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4835 ATGCAAACCCCTCTCACACTCACTACTCTCTTACTCTACTTCTTCATCTTCTTCACTTTTTCAGCCTCCATCTCAGCCCATGATGAAGCCCAAGCCCAAGATCTAGTCCGTTCCTCCTGCATTCACTCCAGATACCCAAAGTTATGTCTCCGAACACTCTCAAACTACACCGGGCCAGCTAAAAGCCCATTAGACATAGCTCAGGCAGCACTCCGGGTAAGCTTAGCCCACGCCAAGAGAGCCTCCAAATATCTAGTATCTTCCAAAAGTGGGTCCCACAGCAGCAGCTTAAGCAGACGTCAGCAGGCTGATCTAAGTGACTGCAAAGAGCAGATTGCTGATTCAATTGATGAACTTCATAAGAGTTTAGAGGAGTTGCAACATCTGCGACCGGAAACATTCCGGTGGCAGATGAGCAACGCCTTGACATGGGTAAGTGCCGCGCTTACTGATGGCGACACTTGCCTTGATGGGAATGTGAGGCCTGATGTTAAAAAGAGAGTTACTGATCTTGCTAGGGTAACGAGTAATGCTCTTTACATGATCAATCGTGTTGGAAATGGGAAGTTCTAA 573 0.4747 MQTPLTLTTLLLYFFIFFTFSASISAHDEAQAQDLVRSSCIHSRYPKLCLRTLSNYTGPAKSPLDIAQAALRVSLAHAKRASKYLVSSKSGSHSSSLSRRQQADLSDCKEQIADSIDELHKSLEELQHLRPETFRWQMSNALTWVSAALTDGDTCLDGNVRPDVKKRVTDLARVTSNALYMINRVGNGKF* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4835 190 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 185 IPR035513 -
Tpr4g4835 190 SMART PMEI_2 31 181 IPR006501 GO:0004857
Tpr4g4835 190 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 185 IPR035513 -
Tpr4g4835 190 PANTHER PECTINESTERASE INHIBITOR 3 9 187 - -
Tpr4g4835 190 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 183 IPR006501 GO:0004857
Tpr4g4835 190 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 187 - -
Tpr4g4835 190 Coils Coil 109 129 - -
Tpr4g4835 190 CDD PMEI-like_3 38 184 - -
Tpr4g4835 190 Pfam Plant invertase/pectin methylesterase inhibitor 34 180 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4835 Tpr-Chr4 58144864 58145858 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4835 35 185 Carbohydrate Esterase AT3G14310 32.121 1.96e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4835 - - gmx:100816686 226.098