Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4823 ATGGAATTCGGTGGAGGCTCGAAAGTAACCGGGATTAGACAGATTGTGAGACTAAAAGAATTACTTCAAAAATGGCAAAATGTCACATTTGGCCCGAAACTACCTCCGGTTCCCAGACTTGAAGAATCTGATGACGGTTCCAGATCACCAATAATCAACAAAAGGATAACGAATCTCCAAAGTTATGAATCTGATGAAGAAAGCTGCCAAACTCCTGATCCTGAACCACCCCATGATGTCCCAAAAGGTTACTTGGCTGTCTATGTTGGACATGAGCTTCGACGGTTCATTATTCCAACTAGTTACCTTAGCCATTCCTTATTCAAAAAGTTGCTTGAAAAGGCCGCTGAGGAATACGGATTTGATCAGAGCGGCGGGCTCACGATACCATGTGAGATCGAGACCTTTAAATACCTCATCAAATGCATCGAGAACCAAGAGAAAGAACAACATGACGACTTCTCGTTTGCAAACTCCGAAACAAAACCAGAAGAAACCTTGGAAGAGTAA 510 0.4275 MEFGGGSKVTGIRQIVRLKELLQKWQNVTFGPKLPPVPRLEESDDGSRSPIINKRITNLQSYESDEESCQTPDPEPPHDVPKGYLAVYVGHELRRFIIPTSYLSHSLFKKLLEKAAEEYGFDQSGGLTIPCEIETFKYLIKCIENQEKEQHDDFSFANSETKPEETLEE* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4823 169 MobiDBLite consensus disorder prediction 149 169 - -
Tpr4g4823 169 Pfam Auxin responsive protein 61 143 IPR003676 GO:0009733
Tpr4g4823 169 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 154 IPR003676 GO:0009733
Tpr4g4823 169 MobiDBLite consensus disorder prediction 31 50 - -
Tpr4g4823 169 MobiDBLite consensus disorder prediction 62 81 - -
Tpr4g4823 169 PANTHER SMALL AUXIN-UP RNA-RELATED 7 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4823 Tpr-Chr4 57834843 57835609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4823 1 167 Calmodulin-binding Proteins AT5G20810 63.314 3.40e-69 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4823 K14488 - cpap:110808074 218.394