Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4822 ATGGAAAAAGTTGCAAAACTAACAAAGCTTAAGTCAGTGCTCAAGAAATGGAACACCTTCACATATTACAACAATAATAAGCACAACCGCTCCAGCATCAGAGCGGTTGCTAACGATGATGTTGACTCATGTGCGTTGTCGGGACAAGACCTTCGCCCAGTGTTCGTTGGAAAGACGCGACGACGTTACCTTGTAAATTCTGAGGTTGTTGAACATCCGCTTTTCCGGGAGCTTGTGGATAGGTCTCGTGACTCGACCGATGTAAACATCGATGATGATGAGGTTAACGTGGCTTGCGAGGTTGTCCTATTCGAGCATATGTTGTGGATGCTCGAGAACTCTGATCCTCAACCTGAATCGCTGGATGAACTTGTTGATTATTACAGTTGCTAG 393 0.4529 MEKVAKLTKLKSVLKKWNTFTYYNNNKHNRSSIRAVANDDVDSCALSGQDLRPVFVGKTRRRYLVNSEVVEHPLFRELVDRSRDSTDVNIDDDEVNVACEVVLFEHMLWMLENSDPQPESLDELVDYYSC* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4822 130 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 130 IPR003676 GO:0009733
Tpr4g4822 130 Pfam Auxin responsive protein 10 111 IPR003676 GO:0009733
Tpr4g4822 130 PANTHER SMALL AUXIN-UP RNA-RELATED 4 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4822 Tpr-Chr4 57827617 57828351 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4822 3 111 Calmodulin-binding Proteins AT4G34750 23.894 9.11e-06 40.8