Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4815 ATGGTTCCAAGGAATTTTGTTGAGAGATATTGGAAAGATGTATCAAATCCAATTTCCCTTAGACTTCCAAATGAGTCTGTTTGTAAAATGTTTTGGGTGCAATTTGGTGACGAGATTTGGCTTCAGGATTGGAAAAGGTTTGCACGGTCGCTTAGATGCGGAGATCTTAAAGTTTTTCAATACAAAGGAGGATCAGATTTTCATGTCATTATACTTGATGATAGTAAACTAGAAATTGACTATTCAAGTATGATTTGCAACGATAAACAAGAAGCTAAAGAGAGTGATGATGATGGCTATGTTGAGATTACAAATGAGGCTGATAATACCAAACAATCCCTCAAGAAAAAGAAAATCAACTCAAATGATAGTGATACCACTACTGCTACAACTCAAGTGACAAACATTGTCAATAGAAAAATTAATACAAAGGCAACCCAGCAAAAAGTCTTAGAGGCTAATGGAACCAGAGGAGGCAGCGGTAAGAAAGCTAAGAAATGCTCAAAAACTGTAGATGCAAATAAGAGAAGCTGCACTGATGCTCTTGGATTTTTAAACCTTGTTGAAGGAGAAAAACAAATTCAAACCTGGATGTTTTCAAGAAGGAGAAAGACAAATTCAAACCTGGATCTAAGGTAG 639 0.3599 MVPRNFVERYWKDVSNPISLRLPNESVCKMFWVQFGDEIWLQDWKRFARSLRCGDLKVFQYKGGSDFHVIILDDSKLEIDYSSMICNDKQEAKESDDDGYVEITNEADNTKQSLKKKKINSNDSDTTTATTQVTNIVNRKINTKATQQKVLEANGTRGGSGKKAKKCSKTVDANKRSCTDALGFLNLVEGEKQIQTWMFSRRRKTNSNLDLR* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4815 212 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 1 176 - -
Tpr4g4815 212 Gene3D - 1 76 IPR015300 -
Tpr4g4815 212 SUPERFAMILY DNA-binding pseudobarrel domain 1 73 IPR015300 -
Tpr4g4815 212 PANTHER B3 DOMAIN-CONTAINING 1 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4815 Tpr-Chr4 57707180 57710164 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4815 2 83 B3 DNA Binding Superfamily AT3G18990 35.294 4.94e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4815 - - mtr:MTR_6g061070 233.802