Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4814 ATGTCTGAACTGTATAATGATCCATTGCCATCAAGTGATGTCCCTACACCTGTCTTTAATTCTGCAGAAGCGAATGTTGATACATCTGGTAAGACTTCTGTTACTTTAGGTCTTAATGTTGAAAATCCTGCTGAAACCCTAGGTTTAAAGGATCCTGTTGTGTCTGAAAAATTGGGGAAAACTGCTCCTAAACCCCCTACTGCTGTTAATACTGATATTGGTGCTTCCACTGAGACCAATGAGGCTGTTGCTACTGAGTCTCTCAAGAAAACTACTCCTGAGACTCATGTTGCGCCTAGTGAAAATATTGAGGATCATTCTGAGTCTGATGAGAGTCCTCAACCTAAGTCTGCTAATAAAGAAACTGTTCCTAATAAGGTTGTAGATGAAAATCCTGAGGTTGTAATTGTTAATGAAACAACTGTGAGTGAAAAGCTTGTCAAAGAATTTTTGATAAATGTGGCTGACAACTGTAATGATCCTGCAAGTCCTGAATACAGGCAGGTATTTGTTCGTGGTAAATGTGTTAAGTTCTCATCAACTATAATCAACCAATATTTGCAAAGGGATTCTGATGAAGTGACTCCTCTAAAAGTCACAGACAATGAGGTCTGCAAGGTCCTCACTGGTGGAAGAATCAAGATGGGTGATCCTTGTTATAAAGCACCTGAACTTTTGCTGGGTTTTACCAACTACTCAACTGCAGTTGATATCTGGTCTATGGGCTGCATATTTGCTGAGATGATTAAGTTCCAACCTCTGTTTATTTGTAACGATGGACCGAAGATATTGACCGAGATATTTTGTTTGCTTGGCATGCCAACAGAAGAAAACTGGCCTGGTGTGGCTTCTATGTGCAGCTTTATTGAATTTGAAGCATTTGACCCTCCCATAAAGCCGAAGGACCTTGCAGCTGAATTCCCTAAGCTTGAACCAGATGGTCTTGATCTTCTTTCGAAAATGCTTTGCCTATGCCCAAATAGCAGGATTTCAGCTGAGGAAGCTGATGACAAAATTAGCAAGTGTACTAATTTATCGTTAAGTAATAAATTAAATTCGTATCTGTTGGAATATAGAATAAAAGAATAA 1089 0.3921 MSELYNDPLPSSDVPTPVFNSAEANVDTSGKTSVTLGLNVENPAETLGLKDPVVSEKLGKTAPKPPTAVNTDIGASTETNEAVATESLKKTTPETHVAPSENIEDHSESDESPQPKSANKETVPNKVVDENPEVVIVNETTVSEKLVKEFLINVADNCNDPASPEYRQVFVRGKCVKFSSTIINQYLQRDSDEVTPLKVTDNEVCKVLTGGRIKMGDPCYKAPELLLGFTNYSTAVDIWSMGCIFAEMIKFQPLFICNDGPKILTEIFCLLGMPTEENWPGVASMCSFIEFEAFDPPIKPKDLAAEFPKLEPDGLDLLSKMLCLCPNSRISAEEADDKISKCTNLSLSNKLNSYLLEYRIKE* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4814 362 MobiDBLite consensus disorder prediction 1 40 - -
Tpr4g4814 362 PANTHER CELL DIVISION PROTEIN KINASE 213 335 - -
Tpr4g4814 362 MobiDBLite consensus disorder prediction 70 98 - -
Tpr4g4814 362 MobiDBLite consensus disorder prediction 1 127 - -
Tpr4g4814 362 Gene3D Transferase(Phosphotransferase) domain 1 172 352 - -
Tpr4g4814 362 ProSiteProfiles Protein kinase domain profile. 1 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4814 362 Pfam Protein kinase domain 194 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4814 362 SUPERFAMILY Protein kinase-like (PK-like) 216 335 IPR011009 -
Tpr4g4814 362 PANTHER CYCLIN-DEPENDENT KINASE 213 335 - -
Tpr4g4814 362 SMART serkin_6 67 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4814 362 MobiDBLite consensus disorder prediction 99 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4814 Tpr-Chr4 57675740 57694038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4814 195 337 Core Cell Cycle Gene Families AT2G38620 45.455 3.52e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Tpr4g4814 Pkinase 8.2e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4814 K02206 K07760 gmx:100804719 137.887