Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4809 ATGGAAACCTATGATGAGTCTGTTGATGCTGATTCCATTCATTCATCTGAACGTGATTCATGGGACGATGAGTTGGACGATGATGGGAGTTATTCGGTATCTAGTGCGGATAAAAGTTCAACGGATGGCAACAATGATGTAGATGAAGTTGGAGGTGATATTAAGGTAAGGTTTGATACCATAACTGCTGAAGAAATTCGTTGTATGGAATTTGCTACTGTGAGTGAAGCTTATGACTTTTATTACCGTTATGGTAAATATAATGGTTTTGCTGTTAGGAAAAGTGATAGTAGGGTAACAGGGAGTGGAGATAATAAAGTAATAAAAATGAAGCAGTTTGTATGCAACAAACACGGTGTAAGAGAGAAGAGACACTTAGTTAGGACAGATAGGAAATTAGAACATAGACGTTTGACTCGTACTCAGTGTGGAGCTAGGCTTCGTGTGAATTACAAAGCTGAAAAGGATAGATATGTTGTTACAGCTTTTGAAGAGACTCATAACCATGAATTAACCCCAGCTAGGTTTGTGCACTTACACCCCGTATATCGTAAAATTTTTGAGACAGATAAGGCTCAGGTGGATGGTCTTCAGAAACGTGGTATTAGAACATGCCATATAATGGGGTACATGGTTGCACAAAAAGGTGGATATGCAGATGGTGATGTTGCCGCATCTTTAAACTATCTAAATATGAAGTCGTCTACTGATCCCATGCTTTATGCTGAGTATGCAGTAGACAATATTAATGGAAGAATGAATACTCTTTTTTGGGCTGATGGGATTAGTAGGACCGACTATTTTTGTTTTGGTGATGTGCTTGCATTTGACACGACTTACAGCAAGAACAAATACAACTATCCGTTGGTTATATTTTCAGGGTGTAACCATCACTCTCAAACAGTAATTTTTGGTGCTGCATTGGTGTCAAATGAAACGACAGAGACATATAAGTGGGTGTTGAGGTGTTTCCTAGAATGCATGGAAGGTAAACAACCAAAAGCGGTGGTAACAGATGGAGATGGGGCAATGAGGGAGGCCATAAAACAGATATTTCCCGATGCTAACCATAGGTTATGCGCTTGGCATTTGAATAAGAATGCAGGTGAGAATGTGAAGAACGGGAATAATTTTTTGGACGGTTTTTCAAAGGCCATGTACTCAAATTTTACTATAGATGAATTTGAAGAGTATTGGTCACATATGATTAAAGAAAATGGAGTGCAAGGACATCCATGGGTAGTCAAAACGTACGAGAATAGGTCATTGTGGGCAACTGCATATCTACGTGATAACTTTTTCGGATGGATAAGAACTACGTCGCAATGTGAAGCTGTTAATGCAATTATTAAGAGTTATGTAAGGAAGAAAGGATGCATTTTTGAATTTATGAACAACTTTGATCAGGCTCTGAGAGATTACAGAAATAACGAATTGGTTGCTGATTTTAAATCATCGTCTACAGATCCTGTATTGTCGACGCAGCTGCCTGTGATTGAGAGTCATGCCTGTAAAATATATACAGCGGCGGTTTTCAAAGAAGTTAGACATGAAATTTTGAAGGCCGGTGAATTGATAGTTAGGGATAAAAGTGAAGTGGGGGGGGAAGAACACGTTGATCGTATTCCAGACAATTTGGTTTTGTCGCGATGGACCAAGGATGCAAAAATTCAGTATTTGAACATCAGCAATTGTAATGATAATGTTGATTCGAATACGATTGCGGAAGCTCGTTTTGGTTCATATTGTACGGTTTTAACAGATTTTTGCAGAGAAGCTTCAAAAAAGGATGGTGTTTACGCGCAAATAATGGAAGACCTTATGCAGCTGAAAATAAAGTACTGCAGTAATGATGATGCAGCAGTTGGTACACAAAAGTCAGCAGTAGGTGATCCAGTTATGGTTAAGAGTAAAGGTGCGCCGAAGAAAAAAAAAATGACACAAAAGCTGTCAGGCGCCGTTCAAAATGCAAAAATACAACTCCTAATGCTAGGAGATATTCGGTAA 2007 0.3881 METYDESVDADSIHSSERDSWDDELDDDGSYSVSSADKSSTDGNNDVDEVGGDIKVRFDTITAEEIRCMEFATVSEAYDFYYRYGKYNGFAVRKSDSRVTGSGDNKVIKMKQFVCNKHGVREKRHLVRTDRKLEHRRLTRTQCGARLRVNYKAEKDRYVVTAFEETHNHELTPARFVHLHPVYRKIFETDKAQVDGLQKRGIRTCHIMGYMVAQKGGYADGDVAASLNYLNMKSSTDPMLYAEYAVDNINGRMNTLFWADGISRTDYFCFGDVLAFDTTYSKNKYNYPLVIFSGCNHHSQTVIFGAALVSNETTETYKWVLRCFLECMEGKQPKAVVTDGDGAMREAIKQIFPDANHRLCAWHLNKNAGENVKNGNNFLDGFSKAMYSNFTIDEFEEYWSHMIKENGVQGHPWVVKTYENRSLWATAYLRDNFFGWIRTTSQCEAVNAIIKSYVRKKGCIFEFMNNFDQALRDYRNNELVADFKSSSTDPVLSTQLPVIESHACKIYTAAVFKEVRHEILKAGELIVRDKSEVGGEEHVDRIPDNLVLSRWTKDAKIQYLNISNCNDNVDSNTIAEARFGSYCTVLTDFCREASKKDGVYAQIMEDLMQLKIKYCSNDDAAVGTQKSAVGDPVMVKSKGAPKKKKMTQKLSGAVQNAKIQLLMLGDIR* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4809 668 Pfam MULE transposase domain 273 367 IPR018289 -
Tpr4g4809 668 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 38 532 IPR031052 GO:0006355
Tpr4g4809 668 MobiDBLite consensus disorder prediction 1 47 - -
Tpr4g4809 668 Pfam FAR1 DNA-binding domain 79 172 IPR004330 -
Tpr4g4809 668 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 38 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4809 Tpr-Chr4 57545875 57548091 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr4g4809 MULE 4.3e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4809 - - ccaj:109792835 689.493