Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4795 ATGGCCGGACGTAATGACCTTGCTATTGCAAATGCGTTGAACAATATTGCCCAGGCCTTTGGGAATATTCAGGGTAATGCGGAGGAAGAGAGGCTGGATAGATTTTTGAAGAATAACCCTCCCACGTTCAAAAGGATGTATGATCCTGAGGGTGCACAGGATTGGCTTCAGGAGATTGAAAGAATATTCAGGGCTATGGCGTCGACAGACTCACAGAGGGTGACATTGGCAACCCATATGTTGAAGGGGGAGGCTGACCGCTGGTGGGGCAACGCGCGACAAAGAATGCAAGCGGCAGGCATCCTAATCACTTGGGCCGGGTTCAAAGGGGCCTTCTTGGAAAAGTACTTCCCTGCTGATGTTCAGAGCAAGAAAGAGATGGAATTCTTGGGGCTGAGCCAAGGTACTATGTCGGTGGCCGAATATGCTGCCAAATTTGAAGACCTGATAAGATATTGTCCCCACTACAACAATGTTGAGAACGAGAGGTCGAAGTGCGTCAAATTCGAGAATGGCTTGCGACCAGAGATCAAGGCAGGTATTGAATATCAAGAGCTCCGTCAGTTTGCTACCTTGGTCAATAAGAGTCGGATCTATGAAGAAGATAACAAAGCTAAGAGCAACCACTACAAGGCCTTGAGCGACAAGAAGAATGTGGGCCAGAACCGCAGCAAACCATATGACAAGCCGAAAGTAGATCAGGAAGGTAAGCAGAAGACTACTGATGGGCATGACACAAGTGGGGGAGGCCGTTGCTATAGGTGTGGCGAGACAGGACACAAGATCGCAGAGTGCAAGGCGAAGAATCTGAAATGTTATAAATGTGGAAAGCCGGGACATTTTGCAAATGAGTGTAAAAATCCCGTGATTTGTTTTAATTGTTCAGAGCCAGGCCATATTAGTACCAAGTGTGACAAACCATGGAGGACACGAGATGCTACTCCGGCGAAAGGGAAGGTGTTCGCCTTGTGGGGCTCGGAGCCAGATGCATGA 993 0.4844 MAGRNDLAIANALNNIAQAFGNIQGNAEEERLDRFLKNNPPTFKRMYDPEGAQDWLQEIERIFRAMASTDSQRVTLATHMLKGEADRWWGNARQRMQAAGILITWAGFKGAFLEKYFPADVQSKKEMEFLGLSQGTMSVAEYAAKFEDLIRYCPHYNNVENERSKCVKFENGLRPEIKAGIEYQELRQFATLVNKSRIYEEDNKAKSNHYKALSDKKNVGQNRSKPYDKPKVDQEGKQKTTDGHDTSGGGRCYRCGETGHKIAECKAKNLKCYKCGKPGHFANECKNPVICFNCSEPGHISTKCDKPWRTRDATPAKGKVFALWGSEPDA* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4795 330 ProSiteProfiles Zinc finger CCHC-type profile. 291 306 IPR001878 GO:0003676|GO:0008270
Tpr4g4795 330 SUPERFAMILY Retrovirus zinc finger-like domains 268 307 IPR036875 GO:0003676|GO:0008270
Tpr4g4795 330 PANTHER DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE 45 286 - -
Tpr4g4795 330 Pfam Retrotransposon gag protein 76 175 IPR005162 -
Tpr4g4795 330 PANTHER POLYMERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 45 286 - -
Tpr4g4795 330 ProSiteProfiles Zinc finger CCHC-type profile. 251 266 IPR001878 GO:0003676|GO:0008270
Tpr4g4795 330 ProSiteProfiles Zinc finger CCHC-type profile. 271 287 IPR001878 GO:0003676|GO:0008270
Tpr4g4795 330 Pfam Zinc knuckle 271 287 IPR001878 GO:0003676|GO:0008270
Tpr4g4795 330 Pfam Zinc knuckle 290 306 IPR001878 GO:0003676|GO:0008270
Tpr4g4795 330 Pfam Zinc knuckle 251 266 IPR001878 GO:0003676|GO:0008270
Tpr4g4795 330 SMART c2hcfinal6 251 267 IPR001878 GO:0003676|GO:0008270
Tpr4g4795 330 SMART c2hcfinal6 290 306 IPR001878 GO:0003676|GO:0008270
Tpr4g4795 330 SMART c2hcfinal6 271 287 IPR001878 GO:0003676|GO:0008270
Tpr4g4795 330 MobiDBLite consensus disorder prediction 210 243 - -
Tpr4g4795 330 Gene3D - 228 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4795 Tpr-Chr4 57112113 57113105 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4795 - - gmx:121174731 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4795 4 57112113 57113105 Tpr4g4795 4 57112113 57113105 ECH
Tpr4g4795 4 57112113 57113105 Tpr2g0432 2 5037711 5039689 ECH