Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4791 ATGGCATCAAGATCCTATGCTAATCTCTTAGACTTAGCTGGTGGAGGAGACTTCCTTGATAATATTCCTCACACCCCAAGAACTCTTCCAAGGGTTATGACTGTTCCTGGAATTATTTCCGACCTGGATGGTGATTCAGATGTTAGTTCTTCTGGATGTCGGGAGCGGAAAATCATCGTGGCAAACATGTTGCCACTGCAGGCTAAAAGAGATATAGAAACTGGTAACTGGTGTTTCAGTTGGGACGAGGATTCAATTCTATTACAATTAAAAGATGGTTTTTCTTCTGATACTGAGGTAATCTATGTGGGTTCCCTCAAGGCGGATATAGATATGGGTGAGCAGGATGCAGTTGCTCAGAAATTACTGGATGACTTTAATTGTGTGCCCACCTTTCTACCCCATGAGCTGCAGAAAAAGTTCTATCTTGGTTTTTGTAAGCAGCAGCTCTGGCCTCTCTTTCATTATATGCTACCTATATGCTCAGATCACGGTGATCGCTTTGACCGCACGCTTTGGCAGGCTTATGTTTCTGCAAACAAAATATTTGCAGACAAAGTCATGGAAGTGATCAATCCTGATGATGATTTTGTTTGGGTTCATGACTACCATTTGATGGTTTTGCCTACTTTCTTGAGGAAACGATTTAATCGAGTTAAACTTGGGTTTTTTCTTCATAGTCCTTTCCCGTCGTCTGAAATTTACCGGACTTTGCCAGTAAGGGATGAAATCCTGAAGGGATTGTTGAATTCGGATTTAATTGGTTTTCATACATTTGATTACGCTCGCCACTTTCTTTCTTGCTGCAGTAGAATGCTAGGTCTGGACTATGAATCTAAGCGCGGACATATAGGACTTGATTACTTCGGCCGCACTATATTTATCAAAATTTTGCCTGTAGGCATTCACATGGGTAGGCTTGACTCTGTACTAAATCTTCCTTCTACATCCTCTAAACTAAAAGAGATTCAGGAAGAGTTTAAGGATAAAAAAGTTATTCTGGGTGTTGACGACATGGATATTTTTAAGGGTATCAATCTGAAGTTTCTCGCTGTGGAGCAGCTGCTGCAGCAGAAGCCAGATTTGCAGGGTCAAGTTGTCCTAATTCAAGTTGTAAATCCTGCAAGGGGTTCAGGGAAGGATGTTCAGGAAGCAAAGAAGGAAGCATATTCAATTGCTCAAAGGATCAATGATAGATATGGTTCAAATGATTATCAGCCAGTCATTATAATTGACCGCCACGTTCCTCGTTTTGAGAAGAGTGCCTATTATGCTGTTGCCGAGTGTTGCATTGTCAATGCTGTAAGGGATGGAATGAACTTGGTCCCATACAAATATATTGTCTGCAGGCAGGGAACTCCAAAACTGGACGAAGCTGTGGGCAGAAGAAGTGATTGTCCTCGGACAAGCATGCTTGTTGTGTCTGAGTTCATTGGTTGTTCACCTTCTCTGAGTGGGGCCATCAGGGTCAATCCTTGGGATATAGAAGCAGTCGCTGATGCTCTGCATTTGGCCCTCACTATTGTGGAACCAGAGAAGGAGTTGCGTCATGAGAAACACTATAGATATGTTAGTTCTCATGACGTGGCATATTGGGCACGCAGTTTTATGCAGGATTTGGAGAGAGCATGCAAAGATCATTATACAAAAAGGTGCTGGGGAATTGGTTTGGGGTTGGGGTTTAGAGTTATTTCTCTTTCTCACGGTTTTAGGAAGTTATCCATTGACCATATTGTATCAGCATACAAAAGAACCACTAGAAGGGCTATCTTTCTTGATTATGATGGCACTATTGTATCACAAACTTCTATTAATAAAACCCCCAGCCCTGAAGTCATATCTGTGCTTAATGCTCTGTGTAATGATACCAAGAATATTGTGTTCATTGTTAGTGGAAGGGCAAGAGATTCTCTGAGTGAATGGTTCACTTCATGCAAACTGCTTGGACTTGCAGCTGAACATGGGTACTTCCTAAGGTGGAATAGCGACTCTGAATGGGAAACCAGTCATTTCTCTGCGGACCTTGATTGGAAACAGATAGTGGTACCCGTCATGCAGTCGTATACAGAAGCAACGGATGGATCTAACATCGAAATTAAGGAAAGTGCATTGGTGTGGCATCATCAAGATGCAGACCCGGATTTTGGTTCCTGCCAAGCCAAGGAATTGTTGGATCACTTGGAAAGTGTTCTTGCTAATGAACCAGCACTTGTTAAGAGAGGTCAGCATATTGTTGAAGTTAAGCCACAGGGAGTAACCAAAGGTTTGGTAGCTGAAAAGGTTCTGTTGAATATGGTTAGTGGCGGCAATCCACCGGATTTCGTGATGTGCATCGGAGATGATAGGTCTGATGAAGACATGTTTGAAAGCATTTTGAGTACAGTCTCGTGCCCATCGTTACCAGCAGCTCCGGATATTTTTGCCTGCACCGTAGGAAGGAAGCCTAGCAAGGCCAAGTATTTCCTCGATGATCCTTCTGATGTTGTAAGGATGCTTCAAGGTCTTGCTGCCTCATCAAATCCAACAAAGCCCAGGCATCTTGCCCAATTCCAGGTTTCTTTTGAGAGCACAGTTTCTTAG 2580 0.4279 MASRSYANLLDLAGGGDFLDNIPHTPRTLPRVMTVPGIISDLDGDSDVSSSGCRERKIIVANMLPLQAKRDIETGNWCFSWDEDSILLQLKDGFSSDTEVIYVGSLKADIDMGEQDAVAQKLLDDFNCVPTFLPHELQKKFYLGFCKQQLWPLFHYMLPICSDHGDRFDRTLWQAYVSANKIFADKVMEVINPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPVRDEILKGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTIFIKILPVGIHMGRLDSVLNLPSTSSKLKEIQEEFKDKKVILGVDDMDIFKGINLKFLAVEQLLQQKPDLQGQVVLIQVVNPARGSGKDVQEAKKEAYSIAQRINDRYGSNDYQPVIIIDRHVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPKLDEAVGRRSDCPRTSMLVVSEFIGCSPSLSGAIRVNPWDIEAVADALHLALTIVEPEKELRHEKHYRYVSSHDVAYWARSFMQDLERACKDHYTKRCWGIGLGLGFRVISLSHGFRKLSIDHIVSAYKRTTRRAIFLDYDGTIVSQTSINKTPSPEVISVLNALCNDTKNIVFIVSGRARDSLSEWFTSCKLLGLAAEHGYFLRWNSDSEWETSHFSADLDWKQIVVPVMQSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPALVKRGQHIVEVKPQGVTKGLVAEKVLLNMVSGGNPPDFVMCIGDDRSDEDMFESILSTVSCPSLPAAPDIFACTVGRKPSKAKYFLDDPSDVVRMLQGLAASSNPTKPRHLAQFQVSFESTVS* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4791 859 TIGRFAM T6PP: trehalose-phosphatase 586 835 IPR003337 GO:0003824|GO:0005992
Tpr4g4791 859 CDD GT20_TPS 56 541 IPR001830 GO:0003824|GO:0005992
Tpr4g4791 859 Gene3D Glycogen Phosphorylase B; 309 525 - -
Tpr4g4791 859 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 589 790 IPR006379 -
Tpr4g4791 859 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 56 545 - -
Tpr4g4791 859 SUPERFAMILY HAD-like 588 836 IPR036412 -
Tpr4g4791 859 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 8-RELATED 1 844 - -
Tpr4g4791 859 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 844 IPR001830 GO:0003824|GO:0005992
Tpr4g4791 859 Gene3D - 717 848 IPR023214 -
Tpr4g4791 859 Gene3D - 587 697 IPR023214 -
Tpr4g4791 859 CDD HAD_TPP 589 830 - -
Tpr4g4791 859 Pfam Glycosyltransferase family 20 56 541 IPR001830 GO:0003824|GO:0005992
Tpr4g4791 859 Gene3D Glycogen Phosphorylase B; 50 308 - -
Tpr4g4791 859 Pfam Trehalose-phosphatase 591 826 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4791 Tpr-Chr4 56869621 56874847 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4791 1 858 Trehalose Biosynthesis Gene Families AT1G23870 74.914 0.0 1368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4791 K16055 - gmx:100775779 1534.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4791 4 56869621 56874847 Tpr4g4791 4 56869621 56874847 ECH