Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4776 ATGGCTTCATCAATCAAAATCTCAAGGCTCATCTCTCGCTCGATTTCCTCTGCTTCTTCTACCTCCTTGTTTTCTCGAGGTGCGAACAGTTATCTTGGTGGATTACTCTCTAAATATAGCACTGCTGCTGCCTTTGATGAACAAACAATTAAACCATCAGTGCAAGTAGAACACACACAACTCTTAATTGATGGAAAATTTGTAGATGCTGCTGCTGGTAAAACATTTCCATCATTGGATCCAAGGACCGGGGAAGTGATCGCTCATGTTGCTGAGGGTCACTCTGAAGATGTTGATAGAGCTGTTGCAGCTGCACGCAAAGCATTCGATCTAGGGCCGTGGCCTAAGTTGCCAGCCTATGAAAGGCAAAAGATATTGTTGCGTGCTGCTGATCTGATTGAAAAGCATAATGACGAAATTGCAGCACTTGAGACTTGGGATAATGGGAAGCCATACGAACAATCTGCTCAAATTGAAATTCCAATGCTTGTTCGCCTATTTCGTTACTATGCTGGTTGGGCAGATAAGATTCATGGTCTCACAGTTCCAGCTGATGGACAGTATCATGTGCAGACATTGCATGAACCAATCGGTGTTGCTGGTCAGATCATTCCATGGAACTTCCCTCTTCTCATGTTTGCTTGGAAGGTGGGACCCGCATTAGCATGTGGCAACACTGTTGTTCTGAAAACCGCTGAGCAGACACCATTGTCTGCTTTGTATGTAGCAAAACTATTTCACGAGGCTGGTCTTCCTCCCGGTGTGTTGAATATTGTGTCTGGCTTCGGTCCAACTGCCGGTGCTGCTCTTGCTAGTCACATGGATGTAGATAAGCTTGCATTTACTGGCTCAACCGATACCGGAAAGGTTGTCCTTCAACTGGCAGCTAAAAGCAATCTTAAACCTGTAACTTTGGAGCTTGGTGGGAAATCTCCGTTTATTGTTTGTGAAGATGCCGATGTAGATGAAGCTGTTGAGCTAGCTCACTTTGCCTTATTTTTCAACCAGGGACAATGTTGTTGTGCTGGCTCTCGAACATTTGTACATGAACGTGTATATGATGAGTTTGTCGAGAAAGCAAAGGCCCGCGCTTTGAAACGTGCTGTTGGCGATCCATTCAAGTCAGGAACAGAGCAAGGTCCTCAGATTGATTCAAAGCAATTTGAGAAAATATTGAAGTATATTAGATCTGGTGTTGAAAATGGTGCTACACTTGAAACTGGAGGAGAAAGGCTTGGCAGCAAGGGATTCTATATTCAGCCTACTGTCTTCTCAAATGTTCAGGATGGTATGCTGATTGCAAAGGAAGAGATATTTGGTCCAGTGCAATCCATATTTAAATTCAAGGACCTTGGCGAGGTAATTCAAAGAGCAAACAATACAAGGTATGGTCTTGCAGCAGGGGTGTTCACAAAGAACATAGACACTGCAAATACTTTGACTAGAGCATTGAGGGTTGGAACAGTTTGGGTAAATTGCTTTGATACATTTGATGCTGCAATTCCTTTTGGTGGTTATAAGATGAGTGGACAAGGCAGAGAAAAAGGTGAATACAGTCTGAAGAATTACTTGCAAGTTAAGGCTGTTGTTACACCCTTGAAGAATCCAGCATGGCTTTGA 1620 0.4346 MASSIKISRLISRSISSASSTSLFSRGANSYLGGLLSKYSTAAAFDEQTIKPSVQVEHTQLLIDGKFVDAAAGKTFPSLDPRTGEVIAHVAEGHSEDVDRAVAAARKAFDLGPWPKLPAYERQKILLRAADLIEKHNDEIAALETWDNGKPYEQSAQIEIPMLVRLFRYYAGWADKIHGLTVPADGQYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKTAEQTPLSALYVAKLFHEAGLPPGVLNIVSGFGPTAGAALASHMDVDKLAFTGSTDTGKVVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDEAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRAVGDPFKSGTEQGPQIDSKQFEKILKYIRSGVENGATLETGGERLGSKGFYIQPTVFSNVQDGMLIAKEEIFGPVQSIFKFKDLGEVIQRANNTRYGLAAGVFTKNIDTANTLTRALRVGTVWVNCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTPLKNPAWL* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4776 539 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 305 312 IPR029510 GO:0016491
Tpr4g4776 539 SUPERFAMILY ALDH-like 53 533 IPR016161 GO:0016491
Tpr4g4776 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 311 500 IPR016163 GO:0016620
Tpr4g4776 539 CDD ALDH_F2BC 56 531 - -
Tpr4g4776 539 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 333 344 IPR016160 GO:0016491
Tpr4g4776 539 Pfam Aldehyde dehydrogenase family 68 529 IPR015590 GO:0016491
Tpr4g4776 539 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 33 539 - -
Tpr4g4776 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 73 529 IPR016162 GO:0016491
Tpr4g4776 539 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 33 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4776 Tpr-Chr4 56331357 56340443 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4776 6 539 Aldehyde Dehydrogenase Gene Family AT3G48000 77.341 0.0 891