Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4757 ATGGCTCCAAATATCAACAAAAACAATAAAGAAGGTGAACCTAAGAAACGATCTGGAAAAGGGGGAGGAAATTCCGAGGTTGTAGCTCCGCCGCCTAATTCCAATCCTCCGGAAAATTCTCCAGCGGAATTGCCACCGCCACTGCCACAACCACCGTCTAAGTCTCGTACGACGCCTAAAGCTTCCCCGCCATCGGAATCAGTATCACCTTCGCCGCCACCACCAAAGCCAACACAATCACCACCGCCACTTTCTCCTCCACCACCTTCACCGCCACCTCCATCACCGTCTCCACCACCACCCTCCCTTCCACCGCCGCAACTGTCACCGCCGCCTGCACACAATGTGAATTCTTCATCCCCTCCTTATTTGCCACGTAAACGTCCGTCTCCATCGCAGTTTCAATCCCCGCCTCCCTTGGGGAAGAAGTCTTCACCCTCAAAAGATTCACCTTCTTCTTCTTCTTCTAAACCCTCGAAAGATTCACCTTCTTCTTCTAAACCCTCGAATGATTCACCGAATGATGCCTTGCATGCAAAATCAAGAGATTCTTCTCCGCCTAGCTCCTCGCCCGCTGAAATAGTTGGTTACACCCTTGCCGGAGTTTTTGTTGTTGCCTTAGTTGCTGTAGCTGTTATTCTCGTGTTTAGGAGGAAGAAAACGAAAGGAGATGTGTATGGTGCACCCTATATACCACCACCTCATGGTATTAGTTTTCAAGTAAAACCAAGTGCTAATGGACATTACTATGTACAGCAACCTTCGTATGGAAATATCTATAGCAATGGGAACGTTGGAGGAAGCACCATGAAGCCGCCTTTAGGAGGAGGTCATTTAGATTCGGCACAGCCCATAAGTGCTCAAATAGTTTTTAGTTATGAGATGGTAATGGAAATAACCAATGCATTTTCACATCAAAATGTGATAGGGCAAGGAGGATTTGGGTGTGTTTACAAGGGTAGGCTACGGGACGGAAAAGAAGTGGCGGTCAAGACTCTTAAGGCTGGTAGTGGGCAGGGAGATAGGGAATTTAGGGCTGAAGTTGAGATCATTAGCCGTGTTCATCATCGACATTTGGTATCATTGGTTGGTTATTGCATATCAGAGCAGCAAAGAGTGCTTATCTATGAGTTCCTCCCAAATGGAAATCTTCATCATCACTTGCATGGAAGGGGAATGCCAGTGTTGGGGTGGGCCAATAGGTTGAAGATAGCTATTGGTGCTGCAAAGGGTTTGGCATATCTGCATGAGGACTGCAGCCAAAAGATTATTCACAGAGATATTAAATCCGCCAACATACTTTTGGATGATGCTTTTGAAGCACAGGTTGCGGACTTTGGACTTGCAAGGCTAGCTGATGCTGCGAATACACATGTATCAACTAGGGTTATGGGTACATTTGGGTACATGGCTCCGGAGTATGCAACAAGTGGAAAATTAACAGATAGATCAGATGTTTTCTCATTTGGTGTTGTCCTGCTTGAGCTTGTAACCGGAAGAAAACCAGTTGATGAAACTATGCCTTTGGGAGATGAGAGTTTGGTTGAGTGGGCTCGTCCACAACTCATCCATGCATTTGAGACACGTGATTTTGGTGAACTAGTAGATCCAAGATTAGAAAAACACTATGTGGAGAGTGAAATGTTCAGAATGATAGAGGCAGCTGCAGCTTGTGTTCGACACTCAGCACCTAAACGGCCTCGTATGTCTCAGGTGGTAAGAGCTTTAGACACTGGAGATCAAATATCTGATTTGTCAAATGGGGTGAAATATGGTCAGAGCAGAGTTTATGATTCTGGCCAATATGACAAAGAGATCATGCTATTCAGGATGATGGGCAATGGCAGCTATGGTGATTCTTCTGATTATGATATATACAGTGCAGGATCCGGTCATTCAAGAGAGAATTCGAGACCACGGCATGCATGGATGCATAGTGGTTCGAGTACCGAGTCAGAATCTAAAGCTTTCAATAACCATAGATGCAGTAGTACAGAATGA 2001 0.4563 MAPNINKNNKEGEPKKRSGKGGGNSEVVAPPPNSNPPENSPAELPPPLPQPPSKSRTTPKASPPSESVSPSPPPPKPTQSPPPLSPPPPSPPPPSPSPPPPSLPPPQLSPPPAHNVNSSSPPYLPRKRPSPSQFQSPPPLGKKSSPSKDSPSSSSSKPSKDSPSSSKPSNDSPNDALHAKSRDSSPPSSSPAEIVGYTLAGVFVVALVAVAVILVFRRKKTKGDVYGAPYIPPPHGISFQVKPSANGHYYVQQPSYGNIYSNGNVGGSTMKPPLGGGHLDSAQPISAQIVFSYEMVMEITNAFSHQNVIGQGGFGCVYKGRLRDGKEVAVKTLKAGSGQGDREFRAEVEIISRVHHRHLVSLVGYCISEQQRVLIYEFLPNGNLHHHLHGRGMPVLGWANRLKIAIGAAKGLAYLHEDCSQKIIHRDIKSANILLDDAFEAQVADFGLARLADAANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELVTGRKPVDETMPLGDESLVEWARPQLIHAFETRDFGELVDPRLEKHYVESEMFRMIEAAAACVRHSAPKRPRMSQVVRALDTGDQISDLSNGVKYGQSRVYDSGQYDKEIMLFRMMGNGSYGDSSDYDIYSAGSGHSRENSRPRHAWMHSGSSTESESKAFNNHRCSSTE* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4757 666 MobiDBLite consensus disorder prediction 65 136 - -
Tpr4g4757 666 SUPERFAMILY Protein kinase-like (PK-like) 284 576 IPR011009 -
Tpr4g4757 666 Gene3D Transferase(Phosphotransferase) domain 1 379 593 - -
Tpr4g4757 666 CDD STKc_IRAK 309 577 - -
Tpr4g4757 666 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK13-RELATED 40 646 - -
Tpr4g4757 666 ProSiteProfiles Protein kinase domain profile. 303 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4757 666 MobiDBLite consensus disorder prediction 1 191 - -
Tpr4g4757 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Tpr4g4757 666 PRINTS Proline rich extensin signature 34 46 - -
Tpr4g4757 666 PRINTS Proline rich extensin signature 47 68 - -
Tpr4g4757 666 PRINTS Proline rich extensin signature 70 86 - -
Tpr4g4757 666 PRINTS Proline rich extensin signature 88 105 - -
Tpr4g4757 666 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
Tpr4g4757 666 Gene3D Phosphorylase Kinase; domain 1 279 378 - -
Tpr4g4757 666 Pfam Protein tyrosine and serine/threonine kinase 306 576 IPR001245 GO:0004672|GO:0006468
Tpr4g4757 666 MobiDBLite consensus disorder prediction 628 666 - -
Tpr4g4757 666 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 40 646 - -
Tpr4g4757 666 SMART serkin_6 303 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4757 666 MobiDBLite consensus disorder prediction 137 191 - -
Tpr4g4757 666 MobiDBLite consensus disorder prediction 30 58 - -
Tpr4g4757 666 MobiDBLite consensus disorder prediction 642 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4757 Tpr-Chr4 56100787 56104949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4757 194 638 Trihelix Transcription Factor Family AT1G70460 63.399 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Tpr4g4757 PK_Tyr_Ser-Thr 5.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4757 - - lang:109330554 661.759