Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4739 ATGGGGATACACAACAACAATCATCCTAGAACAACAAATGAAATTGTTAGAGAACAACATTGTCCATTGTTACATAATAGTAAAAAAGATGAGAAAATTGAAGTTGAAATTCAACAAAATGATGATGATAGATCCATTTGTAACAACAATAATGGATCATCATCAGCATCATTTACTGGTTCAGTATTCAATTTATCAACAACAATTATTGGTGCTGGAATCATGGCTTTACCTGCAGCCATGAAAGTTTTGGGTTTAACAATTGGTATTGCTTCAATAATTTTCTTTGCTTTGCTTAGTCACACCTCTTTGGATATTCTTATGAGGTTTAGTAGAGTTGCTAAGGCTCAATCTTATGGTGATATTATGGGGTGTGCTTTTGGAAGTGTTGGAAGATTGGTTTTTCAGATTTCTGTTCTTGTTAATAATTTTGGTATTCTTGTTGTCTACAGCATCATAATTGGTGATGTACTGTCTGGAACAACTTCATCTGGAAGTCATCATTTCGGTGTACTTGAAGGATGGTTCGGAGAACACTGGTCGACTGGGCGGACTTTTGTTCTTCTTGTAACAACCCTTGTTGTATTTACTCCATTAGGATTCTTTAAGAGAATAGATTCATTAAGATATACTTCTGGTTTAGCAGTGGCTTTGGCAATTGTTTTTCTTGTCATAACTGCAGGAATCACATTTGTTAAATTGTTCAATGGAAGTATAGAGAGTCCAAGATTGCTTCCTAATATTACTGATATGACATCTATTTGGAATCTATTCACAGCAGTTCCTGTTCTTGTCACGGCATTTGTTTGTCATTACAATGTGCATACAATAGACAATGAACTCGGAGACTCTTCACTAATACAACCAGTTATATGCGCATCATTGGTTCTATGTTCTGGCATATACATTCTTACAGCTTTATTTGGATTTCTACTATTTGGCGAAGCAACTCTTGGTGATGTACTGGCCAACTTTGATACTGATCTTGGCATCCCTTATAGCAATGTGCTCAACGACATTGTTCGTATCAGCTACGCCCTTCACCTCATGCTTGTTTTCCCTGTTATCTTCTTTTCACTCCGCTTCAATTTGGATGATCTTTTCTTTCCCTCAGCCAAATCATTGGAATTTGATAAGTTCAGGTTTTCGTTGATCACTACTGGACTCATCTTTTTGCTCTATGTGGCTGCAAATTTTGTACCTAGCATTTGGGATGTGTTTCAATTCACCGGAGCAACTGCTACTGTTTGCCTTGGTTTTATTTTCCCTGCTGCAATTGCTCTAAGGGATCCACAAAGCATTGCAACTAAGAAGGACAAAATTTTATCCATTGTGATGATTGTTCTTGCTGTCTTCGCAAATGTTGTGGCTATATACAGTAATGCTGATGCTTTGTTCTGA 1401 0.3683 MGIHNNNHPRTTNEIVREQHCPLLHNSKKDEKIEVEIQQNDDDRSICNNNNGSSSASFTGSVFNLSTTIIGAGIMALPAAMKVLGLTIGIASIIFFALLSHTSLDILMRFSRVAKAQSYGDIMGCAFGSVGRLVFQISVLVNNFGILVVYSIIIGDVLSGTTSSGSHHFGVLEGWFGEHWSTGRTFVLLVTTLVVFTPLGFFKRIDSLRYTSGLAVALAIVFLVITAGITFVKLFNGSIESPRLLPNITDMTSIWNLFTAVPVLVTAFVCHYNVHTIDNELGDSSLIQPVICASLVLCSGIYILTALFGFLLFGEATLGDVLANFDTDLGIPYSNVLNDIVRISYALHLMLVFPVIFFSLRFNLDDLFFPSAKSLEFDKFRFSLITTGLIFLLYVAANFVPSIWDVFQFTGATATVCLGFIFPAAIALRDPQSIATKKDKILSIVMIVLAVFANVVAIYSNADALF* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4739 466 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 13 466 - -
Tpr4g4739 466 Pfam Transmembrane amino acid transporter protein 56 458 IPR013057 -
Tpr4g4739 466 PANTHER AMINO ACID TRANSPORTER 13 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4739 Tpr-Chr4 55906458 55910019 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4739 3 466 Amino Acid or Auxin Permease AAAP Family AT3G30390 59.267 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4739 K14207 - gmx:100778699 671.389