Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4722 ATGGAGCTATTTCCAGCACAACCAGATTTGTCATTGCAAATCAGTCTTCCAAACACCAAACAAACATCAAATTGGAGGAAAAATTCAGATGATCAAGAAGATATGGATTTGGGATTTTGGAAAAGAGCTTTTGAGTCCAAAAGTGATTCAAATTACACCTTTGATCTTTCTCTCTCTAATCCAAGGGTTTCTTCTTCTTCTTCTTCTTCTCCTACTACTACTACTACTACTTCAAACCTCAACAATCTCATAACTCACTCTTTTCAAGACACTAATAATTCCATCAACCCTTTTCAACCATTTCATCAAAACCAAAATAATTACCAAACCCTAAGTGATGAGTTAGGTTTTCTCAAACCTATAAGAGGAATTCCAGTTTATCATCAAAACCCTTCTCCTATTGGATTATTTTCTCAACCATCCTTTAATGCTTCTGTTTCAAGTTCAACAACAACTTTTCAATCTCAAGTACCATTAATTAGATCAAAGTTTTTGCCGCGGTTTCCTTCGAAGCGTAGCGTGAGAGCTCCGAGGATGCGTTGGACTACCAGTCTTCATAATCGTTTTGTTCATGCTGTTGAGCTTTTGGGTGGCCATGAAAGAGCTACACCCAAATCAGTTCTTGAGCTAATGGATGTAAAGGATCTAACTTTATCACATGTTAAGTCTCATTTGCAGATGTACCGGACGGTGAAAATTACAGATAGAGCAGCAGTATCACCAGGAATAGGACAATCTGATATGTATGAAAATGGTTCATCTGGAGACACTTCTGAAGACTTTATGTTTGACATAAACTCTTCAACAAGGTCTAATGATCTACCCATTAAATTGGATAAAGAAATTACTAATCAAGAAAAAGAATGTTGTGGCATTTGGAGAAACTCTTCAAGGGAAGCTTGGTTGCATGGTAACCCAAAGGTTCATCCTATTCAAAATGTGTCTTCTCTTGAGGGAATTGATCCAAAGCATCTAAGCAATGAAAGAACTTCATCAGATGGAAGCTCTTCATCAAGCATTTCAGGAACACGCCTCAAGAAACCAAATTTAGATTTGGAATTCACCTTGAGCACATCACTTTGA 1083 0.3721 MELFPAQPDLSLQISLPNTKQTSNWRKNSDDQEDMDLGFWKRAFESKSDSNYTFDLSLSNPRVSSSSSSSPTTTTTTSNLNNLITHSFQDTNNSINPFQPFHQNQNNYQTLSDELGFLKPIRGIPVYHQNPSPIGLFSQPSFNASVSSSTTTFQSQVPLIRSKFLPRFPSKRSVRAPRMRWTTSLHNRFVHAVELLGGHERATPKSVLELMDVKDLTLSHVKSHLQMYRTVKITDRAAVSPGIGQSDMYENGSSGDTSEDFMFDINSSTRSNDLPIKLDKEITNQEKECCGIWRNSSREAWLHGNPKVHPIQNVSSLEGIDPKHLSNERTSSDGSSSSSISGTRLKKPNLDLEFTLSTSL* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4722 360 MobiDBLite consensus disorder prediction 1 30 - -
Tpr4g4722 360 Pfam Myb-like DNA-binding domain 178 229 IPR001005 -
Tpr4g4722 360 MobiDBLite consensus disorder prediction 11 25 - -
Tpr4g4722 360 MobiDBLite consensus disorder prediction 329 344 - -
Tpr4g4722 360 Gene3D - 176 233 - -
Tpr4g4722 360 SUPERFAMILY Homeodomain-like 174 230 IPR009057 -
Tpr4g4722 360 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 357 IPR044847 GO:0000976|GO:0006355|GO:0010158
Tpr4g4722 360 MobiDBLite consensus disorder prediction 325 344 - -
Tpr4g4722 360 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 177 230 IPR006447 GO:0003677
Tpr4g4722 360 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4722 Tpr-Chr4 55701004 55708321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4722 1 358 G2-like Transcription Factor Family AT4G17695 37.895 3.70e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Tpr4g4722 Myb_DNA-binding 3.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4722 - - aprc:113868756 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1460 2 17217857 17224336 Tpr4g4722 4 55701004 55708321 PCT