Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4700 ATGGCGTTCGAGAATCAAGACACAGTCCGTGAAATTAAGCCAAAAAACAGAAGAATCATGGGTGCTGGAGGACCAGATGATGAGGAAAATAGATGGCCACCATGGTTAAAACCTCTGCTTAAAGAACGTTTCTTTGTTCAATGCAAGTTGCATGCTGATTCACATAAGAGTGAGTGTAATATGTATTGTTTGGATTGTATGAATGGTGCTCTTTGCTCTCTTTGCCTCAATTATCACAAAGATCATCGTGCTATTCAGATAAGGAGGTCTTCATACCATGATGTGATTAGGGTGAATGAGATTCAGAAGGTGTTGGACATATCAGGGGTTCAAACCTATATCATCAACAGTGCAAGAGTTGTGTTCTTGAATGAGAGGCCTCAGCCAAGGCCTGGTAAAGGTGTCACAAACACATGTGAAGTCTGCGAGCGCAGCCTTCTTGATTCCTTTCGATTCTGTTCTCTTGGTTGCAAGATTGTTGGAACTTCAATGAATTTCCAGAAGAAGAACAAGTTAGCTGCAATGATGTCAGACTCAGAGGATTCATACAGCAGCAGTTGCAGCCATGGAAGACTGAAGAACATCAAGGTGCAAAGCTTCACTCCTTCAACACCACCACCAACTTCAGTTAATTACAGAACAGCCAAAAGAAGAAAGGGAATTCCGCATCGCGCACCAATGGGAGGACTAGTCTTGCAATACTAA 705 0.4255 MAFENQDTVREIKPKNRRIMGAGGPDDEENRWPPWLKPLLKERFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLNYHKDHRAIQIRRSSYHDVIRVNEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSMNFQKKNKLAAMMSDSEDSYSSSCSHGRLKNIKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLVLQY* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4700 234 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 230 - -
Tpr4g4700 234 Pfam PLATZ transcription factor 88 159 IPR006734 -
Tpr4g4700 234 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4700 Tpr-Chr4 55407262 55410541 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Tpr4g4700 PLATZ 2.4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4700 - - mtr:MTR_8g066820 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1491 2 17593884 17596551 Tpr4g4700 4 55407262 55410541 PCT