Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4620 ATGAGCAATGGTACTCTTTCTGATTTTATACACACAAATTTAGAGAATAATCCAACTTGGAAAATTCGTCTTAAGATAGCAACAGAGGTAGCTGGAGCTTTGTCATATCTACATTCAGCTGCTTCAATACCAATTATCCACAGAGATATCAAGAGTGCTAACATTCTCTTAGATGAAGACAACACTGCCAAAGTAGCTGATTTTGGAGCTTCAAAATTAGTACCACTTGACCAATCTGAAATAGCCACAATGGTGAAAGGAACTATTGGTTACTTAGACCCAGAGTATATGCTCACGAGCCAATTGACGGAAAAAAGTGATGTATATAGCTTTGGGGTAGTTCTTATGGAGCTGCTAACAGGGGAGAGACCTTTTAGTTTTGGTAGGCCAGAAGAGAGAAGAAATCTTGCTACATATTTTCTGTCCTGCTTCAAAAAGGATAACGTGTTTGAAATTATTGAAGATGGTATGTTGAATGAAGAAAACAAACAAGAGATAAAGGAGGTAACTGATCTTGCGGCAAAGTGTTTGAGACTAAGAGGGAAGGAAAGACCAAGCATGAAGGAAGTGGCTATGGAATTGGAAACAATGATCTTAAATGTAGAGGGGAATCAGCACTATGAAGATATTGATTGA 636 0.3789 MSNGTLSDFIHTNLENNPTWKIRLKIATEVAGALSYLHSAASIPIIHRDIKSANILLDEDNTAKVADFGASKLVPLDQSEIATMVKGTIGYLDPEYMLTSQLTEKSDVYSFGVVLMELLTGERPFSFGRPEERRNLATYFLSCFKKDNVFEIIEDGMLNEENKQEIKEVTDLAAKCLRLRGKERPSMKEVAMELETMILNVEGNQHYEDID* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4620 211 Pfam Protein kinase domain 1 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4620 211 SUPERFAMILY Protein kinase-like (PK-like) 1 196 IPR011009 -
Tpr4g4620 211 SMART serkin_6 1 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4620 211 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 1 198 IPR045274 GO:0007166
Tpr4g4620 211 ProSitePatterns Serine/Threonine protein kinases active-site signature. 45 57 IPR008271 GO:0004672|GO:0006468
Tpr4g4620 211 Gene3D Transferase(Phosphotransferase) domain 1 1 209 - -
Tpr4g4620 211 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 9 1 198 - -
Tpr4g4620 211 ProSiteProfiles Protein kinase domain profile. 1 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4620 Tpr-Chr4 54582334 54583067 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4620 1 206 Receptor kinase-like Gene Family AT1G21240 58.937 1.24e-82 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Tpr4g4620 Pkinase 4.3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4620 - - mtr:MTR_1g010250 318.546