Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4609 ATGTTGAAGATCATCGTCAAAAATTGTCAAACCTCATCTTTTCTGTTGATCTCTTTAGAAACTCAAAGAATGGCTCCTAGTTTGTATACCATTCCCCTCTTCTTCTTGTCCTTGATTTTCTTCATCGTCCCTTCTTATTCAATTCACTTCCGAATTCCCCGTTTTAATCCAAGTGATGCTAACATAATCTACCAAGGTTCTGCAGCACAAGATGATGGAGAAGTTAACTTCAACATCAATGAAAAATATTCATGTCAAGTTGGAAGGGTCATTTATGCCAAAAAAGTGTTACTTTGGGACTCAAACACAGGTCAACTCACTGACTTCACAACCGATTACACTTTCATCATCAACACTCAAAATTATGCTATTTCTAAATATGGTCATGGACTTGCTTTTTTCTTGGCTCCTTTTGGATTTGAAATCCCACCCAATTCTTCTGGTGGCTTTTTTGGCCTATTTAACACCACAACAATGGATTCATCAACAAGTAACCAAATTGTTCATGTGGAGTTTGATTCTTACCCAAATTATGAATGGAATGAGACAATACAACATGTTGGAATCAACAATAATTCAATCATTTCATCAGTATCAACACCTTGGAATGCAAGTTTCCATAGTGGTGACACTGCTGAGGTAAGTATTAGCTACAATTCTATTACCAAGAATTTGACTGTATCTTGGAAATATCAAACCACCTCTAATCCACAAGAGAAAAATAGTCTCTCATATAAAATTGATTTGATGAAAGTTTTACCAGAATGGATTACTGTAGGATTTTCTGCTGCAACAGGTTCCATTGCAGAAGTAAATAGTCTTTTGTCATGGGAATTTAATTCAACTTTGGACAAAACTGATGATAGTAATTCAAAAGAGACGAGATTGATTCTGATAGTAACAGTTTCTTGTGGAGTTGTGATATTAGTAGTGGTAGCATTTGTAGCATATGTAATACTAAAGAAGAAAAGAAAGAAAAGTGAAAAGCAGAGGGAAGAGGCTATGCATTTAACTTCAATGAATGATGATCTTGAAAGAGGAGCAGGGCCAAGAAGATTTACCTACAAAGAACTTGATTTGGCTACCAATAACTTCTCTAAGGATAGAAAATTGGGTCAAGGTGGATTTGGAGCTGTTTTTAAAGGCTACTTTGTTGATTTAGATTTACAAGTTGCTGTAAAGAAAATATCAAGAGGATCAAGACAAGGTAAGAAAGAGTATGTAACTGAAGTTAAAGTCATTAGTCAACTAAGACATAGGAATCTTGTGAAGCTCTTAGGTTGGTGTCATGACAAAGGTGAGTTTCTTCTTGTTTATGAGTTTATGCCAAATGGTAGTCTTGATTCTCATTTATTTGGTAAAAGAACACCTCTTTCTTGGAGTGTAAGGCACAAAATAGCTCTTGGATTAGCCTCTGGTTTGCTTTATCTACATGAAGAATGGGAGAGGTGTGTGGTACATAGAGATATTAAATCAAGTAATGTTATGTTAGATTCTAGTTTCAATGTCAAGCTTGGTGATTTTGGGTTGGCTAAATTAATGGATCACGAACTCGGGCCACAAACAACTGGGTTAGCAGGAACATTCGGCTATTTAGCTCCGGAATATGTGAGTACAGGCAGGGCTAGTAAAGAGTCAGATGTGTATAGTTTTGGGATAGTTGTGATGGAGATAACTACCGGAAAGAAAGCTACCGAAGTAATCAAAGAAAAAGATGAAGAGAAGGGAATGATTGAATGGGTTTGGGATCATTATGGAAGAGGAGAGTTACTTGTGGCCATGGATGAGAATTTGAAAAGGGATTTTGATGAGAAACAAGTAGAGTGTTTGATGATTGTTGGTTTATGGTGTGCACATCCTGATGTAAATCTTAGACCGTCGATTAGACAAGCGATTCAAGTGTTTAATTTTGAGGTTTCATTGCCAAATCTTCCACCAAAGAGACCTGTTGCAACTTATCATGCTCCTCCTACACCTTCTGTAAGCTCAGTTGAAGCTTCCATAACCAATAGCCTTCAAGATGGTCGTTAA 2031 0.3663 MLKIIVKNCQTSSFLLISLETQRMAPSLYTIPLFFLSLIFFIVPSYSIHFRIPRFNPSDANIIYQGSAAQDDGEVNFNINEKYSCQVGRVIYAKKVLLWDSNTGQLTDFTTDYTFIINTQNYAISKYGHGLAFFLAPFGFEIPPNSSGGFFGLFNTTTMDSSTSNQIVHVEFDSYPNYEWNETIQHVGINNNSIISSVSTPWNASFHSGDTAEVSISYNSITKNLTVSWKYQTTSNPQEKNSLSYKIDLMKVLPEWITVGFSAATGSIAEVNSLLSWEFNSTLDKTDDSNSKETRLILIVTVSCGVVILVVVAFVAYVILKKKRKKSEKQREEAMHLTSMNDDLERGAGPRRFTYKELDLATNNFSKDRKLGQGGFGAVFKGYFVDLDLQVAVKKISRGSRQGKKEYVTEVKVISQLRHRNLVKLLGWCHDKGEFLLVYEFMPNGSLDSHLFGKRTPLSWSVRHKIALGLASGLLYLHEEWERCVVHRDIKSSNVMLDSSFNVKLGDFGLAKLMDHELGPQTTGLAGTFGYLAPEYVSTGRASKESDVYSFGIVVMEITTGKKATEVIKEKDEEKGMIEWVWDHYGRGELLVAMDENLKRDFDEKQVECLMIVGLWCAHPDVNLRPSIRQAIQVFNFEVSLPNLPPKRPVATYHAPPTPSVSSVEASITNSLQDGR* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4609 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 485 497 IPR008271 GO:0004672|GO:0006468
Tpr4g4609 676 ProSiteProfiles Protein kinase domain profile. 365 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4609 676 MobiDBLite consensus disorder prediction 656 676 - -
Tpr4g4609 676 Gene3D Transferase(Phosphotransferase) domain 1 442 656 - -
Tpr4g4609 676 PANTHER - 43 672 - -
Tpr4g4609 676 SMART serkin_6 365 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4609 676 CDD STKc_IRAK 371 636 - -
Tpr4g4609 676 PANTHER PUTATIVE-RELATED 43 672 - -
Tpr4g4609 676 SUPERFAMILY Protein kinase-like (PK-like) 349 654 IPR011009 -
Tpr4g4609 676 Pfam Protein kinase domain 365 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4609 676 Gene3D - 46 298 - -
Tpr4g4609 676 MobiDBLite consensus disorder prediction 650 676 - -
Tpr4g4609 676 CDD lectin_legume_LecRK_Arcelin_ConA 48 283 IPR001220 GO:0030246
Tpr4g4609 676 SUPERFAMILY Concanavalin A-like lectins/glucanases 47 297 IPR013320 -
Tpr4g4609 676 Pfam Legume lectin domain 48 292 IPR001220 GO:0030246
Tpr4g4609 676 Gene3D Phosphorylase Kinase; domain 1 350 441 - -
Tpr4g4609 676 ProSitePatterns Protein kinases ATP-binding region signature. 371 395 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4609 Tpr-Chr4 54394200 54396634 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4609 30 654 Receptor kinase-like Gene Family AT5G10530 57.711 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr4g4609 Pkinase 1.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4609 - - mtr:MTR_8g067690 970.304