Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4603 ATGGCTATCATCACATATTCTTCACACTATAATCAAACCAAAAAAACCTTTTCCATGTTAATCATAATTTTTACTTTGTTCTATGCACTCTTTAATCCTGCATACTCAATTTCCTTCAACTTCTCTAACTTTCCCTCAAACTTATATCTAATAAAATTCCAAGGTGATGCATTTTCATCAAACAATGTTCTTCAGCTAACAAAAAACCAACTCGACGGCCCAATCACAAGCAGCGTCGGTCGTGCTTCATTTGACCAACCGGTGAAGCTTTACGACAAAAAAACAAAAGAGCTAACTGATTTCACAACACATTTCACCTTTGTTATGAAAGCCGTTAATTCATCGCTGTTCGGTGATGGTTTATCGTTCTTCATCGCTCCATTTCAATCTGATATCCCAAAAAACTCATCGGGTGGTTACCTTGGTTTATTCAACGAAGACTCTGCATTCAACACTAGCAAAAACCAAATAGTAGCTGTTGAGTTTGATAGTTTTTCGAATGATTGGGATCCAAAACTTGATCATGTTGGAATCAATGTTAATTCGATTCAATCAGTTCAAAATGTATCTTGGAAGAGTAACATGAAAAACGGTTTAATTGCGAATGCTTGGATTTCATATAACTCAACATCAAAAAACCTAACCGTTTTTCTTACTTATGCTAAGAATCCAACTTTTCAGGGAAACTCTAGTCTTTCATATGTTATTGATTTGAGTGAAGTTTTGCCTGAATATGTTAGGATTGGTTTTTCAGCTTCTACTGGTAAATGGATTGAAATACACAACATTTTATCTTGGTCATTCAATTCAAATTTGAAAAATGGTAATGGTAACAACATCAAGGTTGGTTTAGGAGTTGGTTTAAGTGTTGGTTTTGGTTCTATAACTTGTTTTGTAGGTTTGTTTTGGTTCACTTTTTGGAGAAAAAGAAAAGTACTAAATAGTGGTAAAGTGGACAATGATAGAGATTTTCATGTTTCAATAGATGAAGATGAATTTGAGAGAGGAACTGGTCCAAAAAGGTTCACTTACAAAGTACTAAGCAATGCAACAAATGGTTTTGAGGAAAAAGGGAAACTTGGAGAAGGTGGATTTGGAGGTGTTTATAAGGGCATAATTGGAAAAACCAACAAAAAAATGGAAGTGGCTGTGAAAAGGGTTTCAAAAGGGTCAAGACAAGGAAAAAAAGAATACATATCAGAAGTAAGAATAATAAGCAAATTAAGACATAGAAATTTGGTTCAATTATTAGGTTGGTGTCATGAAAAAAATGAGTTATTACTTGTTTATGAATATATGCTTAATGGAAGTCTTGATTTTCATTTATTTGGAAAAGGGGTTATGCTAACTTGGAATTTAAGGTACAAAATAGCATTAGGCTTAGCATCATCACTTCTTTATTTACATGAAGAGTGGGAACAATGTGTGGTTCATAGAGATATTAAATCAAGTAATGTTATGTTAGATGCAAATTTTAATTCCAAGTTAGGTGATTTTGGTCTTGCAAGATTAGTGGATCATGAACTTGGTTCACAAACAACTGTTTTGGCAGGTACTATGGGATATTTAGCACCTGAATGTGTTACTACTGGAAAATCAAGTAAAGAATCTGATGTTTATAGTTTTGGTGTTGTTGCACTTGAAATAGTAAGTGGTAGAAGATCTATTGAACCAAAAGAAGAGGCTAAGAAAGTTAGGCTTGTGGAATGGATTTGGGAGTTATATGGTAAAGGTGAATTATTTGAAGGTGTTGATAGAGGGTTAAATTTGGAATATGATGAAAAGCAAATGGAGTATTTGATGATTATTGGATTATGGTGTTGTCATCCTGATTTTACTATGAGGCCTTCTATTAGGCAAGTGATTAATGTTTTGAATTTTGAAGCTAATTTGCCTAATCTTCCTTCAAAATTTCCTGTGCCTATGTACTTTGCACCTCCTATGGAGATGTGTAGATTTTCCTCTACTTTTGATGGTCTCACAACTAAAGGATCATCTACTCATTCATCATTGTCAGCTGGGTCTAGAAAATCTCTATTGTAG 2043 0.3382 MAIITYSSHYNQTKKTFSMLIIIFTLFYALFNPAYSISFNFSNFPSNLYLIKFQGDAFSSNNVLQLTKNQLDGPITSSVGRASFDQPVKLYDKKTKELTDFTTHFTFVMKAVNSSLFGDGLSFFIAPFQSDIPKNSSGGYLGLFNEDSAFNTSKNQIVAVEFDSFSNDWDPKLDHVGINVNSIQSVQNVSWKSNMKNGLIANAWISYNSTSKNLTVFLTYAKNPTFQGNSSLSYVIDLSEVLPEYVRIGFSASTGKWIEIHNILSWSFNSNLKNGNGNNIKVGLGVGLSVGFGSITCFVGLFWFTFWRKRKVLNSGKVDNDRDFHVSIDEDEFERGTGPKRFTYKVLSNATNGFEEKGKLGEGGFGGVYKGIIGKTNKKMEVAVKRVSKGSRQGKKEYISEVRIISKLRHRNLVQLLGWCHEKNELLLVYEYMLNGSLDFHLFGKGVMLTWNLRYKIALGLASSLLYLHEEWEQCVVHRDIKSSNVMLDANFNSKLGDFGLARLVDHELGSQTTVLAGTMGYLAPECVTTGKSSKESDVYSFGVVALEIVSGRRSIEPKEEAKKVRLVEWIWELYGKGELFEGVDRGLNLEYDEKQMEYLMIIGLWCCHPDFTMRPSIRQVINVLNFEANLPNLPSKFPVPMYFAPPMEMCRFSSTFDGLTTKGSSTHSSLSAGSRKSLL* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4603 680 ProSitePatterns Protein kinases ATP-binding region signature. 360 385 IPR017441 GO:0005524
Tpr4g4603 680 Gene3D - 35 282 - -
Tpr4g4603 680 SMART serkin_6 354 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4603 680 SUPERFAMILY Concanavalin A-like lectins/glucanases 34 274 IPR013320 -
Tpr4g4603 680 Pfam Protein kinase domain 354 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4603 680 ProSitePatterns Legume lectins alpha-chain signature. 242 251 IPR000985 -
Tpr4g4603 680 CDD lectin_legume_LecRK_Arcelin_ConA 37 272 IPR001220 GO:0030246
Tpr4g4603 680 SUPERFAMILY Protein kinase-like (PK-like) 338 649 IPR011009 -
Tpr4g4603 680 Pfam Legume lectin domain 37 274 IPR001220 GO:0030246
Tpr4g4603 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Tpr4g4603 680 ProSiteProfiles Protein kinase domain profile. 354 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4603 680 Gene3D Transferase(Phosphotransferase) domain 1 433 646 - -
Tpr4g4603 680 Gene3D Phosphorylase Kinase; domain 1 339 432 - -
Tpr4g4603 680 PANTHER - 26 658 - -
Tpr4g4603 680 PANTHER RECEPTOR LECTIN KINASE 26 658 - -
Tpr4g4603 680 ProSitePatterns Legume lectins beta-chain signature. 158 164 IPR019825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4603 Tpr-Chr4 54339747 54341789 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4603 18 643 Receptor kinase-like Gene Family AT5G10530 50.544 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr4g4603 Pkinase 4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4603 - - gmx:100777201 944.495