Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4602 ATGTTAATCATAATTTTTACTTTGTTCTATGCACTCTTTAATCCTGCATACTCAATTTCCTTCAACTTCTCTAACTTTCCCTCAAACTTATATCTAATAAAATTCCAAGGTGATGCATTTTCATCAAACAATGTTCTTCAGCTAACAAAAAACCAACTCGACGGCCCAATCACAAGCAGCGTCGGTCGTGCTTCATTTGACCAACCGGTGAAGCTTTACGACAAAAAAACAAAAGAGCTAACTGATTTCACAACTCATTTCTCCTTTGTTATGAAAGCCGTTAATTCTTCGCAGACCGGTGATGGTATATCGTTCTTCATCGCTCCTTTTCAATCCGAAATCCCGATGAACTCCTCGGGTGGTTACCTTGGTTTATTCAGCTCGGACTCTGCATTAAACACTAGCAAAAACCAAATAGTAGCTGTTGAGTTTGATAGTTTTTCGAATGATTGGGATCCAAAACATGATCATGTTGGAATCAATGTTAATTCGATTCAATCGGTTCAAAATGTTTCTTGGAAGAGTAACATGAAAAACGGTTCGATTGCGAATGCTTGGATTTCATATAACTCAACAACAAAAAACCTTACTGTTTTTCTTACTTATGCTAAGAATCCAACTTTTCAAGGAAACTCAAGTCTTTCACATGTTATTGATTTGAGTGAAGTTTTACCTGAATATGTTAGGGTTGGTTTTTCAGCTGCTACAGGTCAATGGATTGAAATACACAACATTCTATCTTGGTCATTCAATTCAACTATGGAAAATGGTAATGGCAAAAAAAATAGCAAGGTTGTTATAGGAGTTAGTTTAAGTGCTGGTTTTGGTTTTATAACTTGTTTTGTATGTTTGTTATGGTTCACTTTATGGAGAAAAAGAAATGGGTTATATAGGGGTAAAATGGACAATAATAGAGATGTTGATGGTTCAATAGATGAAGCTGAATTTGAGAGAGGAACTGGTCCAAAAAAATTCACCTACAAAGTACTAAGCAATGCAACAAATGGTTTTGATGAAAAAGGGAAACTTGGAGAAGGAGGATTTGGAGGTGTTTATAAGGGCATAATTGGAAAAACCAACAAAAAATTTGAAGTGGCTGTGAAAAGGGTTTCAAAAGGGTCAAGACAAGGTAAAAAAGAATACATATCAGAAGTAAGAATAATAAGCAAATTAAGACATAGAAATTTGGTTCAATTATTAGGTTGGTGTCATGAAAAAAATGAGCTATTACTTGTTTATGAATATATGCTTAATGGAAGTCTTGATTTTCATTTATTTGGAAAAGGGGTTATGCTAAGTTGGAATTTAAGGTACAAAATAGCATTAGGCTTAGCATCATCACTTCTTTATTTACATGAAGAGTGGGAACAATGTGTGGTTCATAGAGATATTAAATCAAGTAATGTTATGTTAGATGCAAATTTTAACTCCAAGTTAGGTGATTTTGGTCTTGCAAGATTAGTGGATCATGAACTTGGTTCACAAACAACTGTTTTGGCAGGTACTATGGGATATTTAGCACCTGAATGTGTTACTACTGGAAAATCAAGTAAAGAATCTGATGTTTATAGTTTTGGTGTTGTTGCACTTGAAATAGTAAGTGGTAGAAGATCTATTGAACCAAAAGAAGAGGCTAAGAAAGTTAGGCTTGTGGAATGGATTTGGGAGTTATATGGTAAAGGTGAATTATTTGAAGGTGTTGATAGAGGGTTAAATTTGGAATATGATGAAAAGCAAATGAAGTATTTGATGATTATTGGATTATGGTGTTGTCATCCTGATTTTACTATGAGGCCTTCTATTAGGCAAGTGATTAATGTTTTGAATTTTGAAGCTAATTTGCCTAATCTTCCTTCAAAATTACCTGTGCCTATGTATTTTGCACCTCCTATGGAGATGTGTAGATTTTCTTATACTTCTGATGGTCTTACAAACACAACTAAAGGATCATCTACTTATTCATCATTGTCAGCTGGGTCTAGAAAATCTCTATTGTAG 1998 0.3418 MLIIIFTLFYALFNPAYSISFNFSNFPSNLYLIKFQGDAFSSNNVLQLTKNQLDGPITSSVGRASFDQPVKLYDKKTKELTDFTTHFSFVMKAVNSSQTGDGISFFIAPFQSEIPMNSSGGYLGLFSSDSALNTSKNQIVAVEFDSFSNDWDPKHDHVGINVNSIQSVQNVSWKSNMKNGSIANAWISYNSTTKNLTVFLTYAKNPTFQGNSSLSHVIDLSEVLPEYVRVGFSAATGQWIEIHNILSWSFNSTMENGNGKKNSKVVIGVSLSAGFGFITCFVCLLWFTLWRKRNGLYRGKMDNNRDVDGSIDEAEFERGTGPKKFTYKVLSNATNGFDEKGKLGEGGFGGVYKGIIGKTNKKFEVAVKRVSKGSRQGKKEYISEVRIISKLRHRNLVQLLGWCHEKNELLLVYEYMLNGSLDFHLFGKGVMLSWNLRYKIALGLASSLLYLHEEWEQCVVHRDIKSSNVMLDANFNSKLGDFGLARLVDHELGSQTTVLAGTMGYLAPECVTTGKSSKESDVYSFGVVALEIVSGRRSIEPKEEAKKVRLVEWIWELYGKGELFEGVDRGLNLEYDEKQMKYLMIIGLWCCHPDFTMRPSIRQVINVLNFEANLPNLPSKLPVPMYFAPPMEMCRFSYTSDGLTNTTKGSSTYSSLSAGSRKSLL* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4602 665 Gene3D Transferase(Phosphotransferase) domain 1 416 629 - -
Tpr4g4602 665 Gene3D Phosphorylase Kinase; domain 1 322 415 - -
Tpr4g4602 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Tpr4g4602 665 PANTHER RECEPTOR LECTIN KINASE 12 641 - -
Tpr4g4602 665 ProSitePatterns Legume lectins alpha-chain signature. 224 233 IPR000985 -
Tpr4g4602 665 ProSitePatterns Protein kinases ATP-binding region signature. 343 368 IPR017441 GO:0005524
Tpr4g4602 665 ProSiteProfiles Protein kinase domain profile. 337 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4602 665 PANTHER - 12 641 - -
Tpr4g4602 665 SUPERFAMILY Concanavalin A-like lectins/glucanases 16 255 IPR013320 -
Tpr4g4602 665 Gene3D - 17 269 - -
Tpr4g4602 665 SMART serkin_6 337 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4602 665 SUPERFAMILY Protein kinase-like (PK-like) 321 632 IPR011009 -
Tpr4g4602 665 CDD lectin_legume_LecRK_Arcelin_ConA 19 254 IPR001220 GO:0030246
Tpr4g4602 665 Pfam Legume lectin domain 19 263 IPR001220 GO:0030246
Tpr4g4602 665 ProSitePatterns Legume lectins beta-chain signature. 140 146 IPR019825 -
Tpr4g4602 665 Pfam Protein kinase domain 338 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4602 Tpr-Chr4 54330798 54333216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4602 3 626 Receptor kinase-like Gene Family AT5G10530 50.000 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr4g4602 Pkinase 7.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4602 - - gmx:100777201 962.985