Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4592 ATGATCGAGGTTGATGTGCTTGAACGTCTTACGAAGAGTGATGTGGGATGCTCACGCTGTGTACAGATCTTAAATTGGTTTGATTACCGGAATCACATATGCATTGTTTTTGAGAAGCTTGGACCAAGCTTATTTGATTTTCTAAAGAGAAATAAATACTGCCCATTCCCTGTGGATCTTGTTCGTGAATTTGGACGACAGCTTTTGGAATCTGTAGCATATATGCATGAACTACGCCTAATCCACACTGACCTTAAGCCTGAAAACATACTTCTTGTTTCTTCTGACTATGTAAAACTTCCTAGTTGTAAGAGGGTCTTGTCAGATGAAACACAATATAGGTGCTTGCCCAAGTCTAGTGCTATTAAGCTGATTGATTTTGGAAGTACTGCATTTGCAAATCAGAGCCATAGCTCCATTGTTTCCACAAGGCATTACAGAGCCCCTGAGGTTATCTTAGGGAGGAGCGTTATTTCAGACACATGA 486 0.4053 MIEVDVLERLTKSDVGCSRCVQILNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHELRLIHTDLKPENILLVSSDYVKLPSCKRVLSDETQYRCLPKSSAIKLIDFGSTAFANQSHSSIVSTRHYRAPEVILGRSVISDT* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4592 161 Gene3D Phosphorylase Kinase; domain 1 2 39 - -
Tpr4g4592 161 ProSiteProfiles Protein kinase domain profile. 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4592 161 SMART serkin_6 1 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4592 161 Pfam Protein kinase domain 14 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4592 161 Gene3D Transferase(Phosphotransferase) domain 1 13 155 - -
Tpr4g4592 161 ProSitePatterns Serine/Threonine protein kinases active-site signature. 80 92 IPR008271 GO:0004672|GO:0006468
Tpr4g4592 161 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 154 - -
Tpr4g4592 161 PANTHER BNAA07G37640D PROTEIN 1 154 - -
Tpr4g4592 161 SUPERFAMILY Protein kinase-like (PK-like) 2 155 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4592 Tpr-Chr4 54195918 54197555 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4592 1 95 EF-hand Containing Proteins AT5G22840 37.624 5.87e-15 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Tpr4g4592 Pkinase 1.3e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4592 K08287 - tcc:18587911 282.337