Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4591 ATGGAGAGATTAGAGGGAAGGAGCAAGAAGGATCAAGAAAAGAAAGAAAAGAGAACAAGAAATTTTGTTGATTTAATAACAGGTATTAACAATAACACGCCGAAAAAAGCATTTGTTCATCATGCAAATGATCAAAACAACAATGATGTATCAATAGAGTCACCATCACCACAATTTCAATCACCAAGGCATGTATTTGAGGTACCGATATCGGATTGCGAAAGCACGGAGAGCAGTAACTACAACAGTTGTGCTACGACGCCTCAACGGGCGCCGCAACACGGTGCTACGACGCCTCAACGGGCGCCGCAGCACGGAGGAAAAACATCATCACCAAGAGAAGAAGGAGGAGGATACCACTACCAATGGAGGAATATGATTGAGGGATTGAGGTTTAAGTCTGTGAGGAGATTCTCTACCATTCCTTTGCTTGCTACTAGCTATGAAAGTTCTAGGAGAAATTTGAGGAACAAGTTGGCTCGTATAAGAACTAATGAGGATGATGAGAATGATTTTAATGGCGCTATGGATCTTGATGGTATTACTAAACCTTCTTGGAGAAATTTTAGTTATGAAGATCTTGTTGCTGCAACTGACAATTTCAATCCTGACAACATGATTGGAAAAGGTGGTCATGCAGAAGTGTATAAAGGACGGTTACCTGATGGAACAGTTGTAGCAGTAAAGAGGCTAGTGAAGGATGAAAAAGAAGTTGGAGACAAAGCTGGTGATTTCTTGTCGGAGCTTGGGATCATTGCTCACATTAACCATCCAAATTCAACACGCCTCATTGGTTTTGGAATTGATCGTGGACTCTACTTTGTTCTACAATTTGCATCTCATGGAAGCCTTTCCTCTTTGCTCTTTGGTTCTGAATGTTTGGAATGGAAGACAAGGTACAAGGTAGCACTTGGAGTAGCCAAAGGGTTGCAATATCTCCATGAAGAGTGTCCAAGAAGAATCATTCACAGAGACATCAAAGCCTCAAACATATTACTCAACCAAGATGATGAAGCTGAGATTTCAGATTTTGGATTGGCAAAGTGGCTACCAGATAAATGGGCACATCATGTTGTTTTTCCAATAGAAGGCACATTTGGGTATTTGGCTCCAGAGTATTTCATGCATGGACTTGTGGATGAGAAGACTGATGTATTTGCATTTGGAGTATTGTTACTTGAGCTCATGACAGGTCGTCGTGCAGTCGATTCAAATAGCAGGCAAAGTCTTGTGATTTGGGCTAAACCACTATTGGATGCAAAAAAAGTGAAAGAAATAGCAGATCCAAGATTAGAAGAACAATATGATCCAACTGAAATGATGCTTGCCATGGCAACAGCTTCCATGTGTATCCACCACATGTCCTCTAAAAGGCCATACATGAGCCAGGTTGTGCTACTATTGAAAGGAGAAGAGGTGGCTATGGACCTGACTCAAAAATCAATAGCACCAAGGTCACTTTTGTTAGATGCATGTGATTTAGAAGACTATACTTGTTCTAGTTATTTGAATGATCTCAATCGCCACAAGGAATTAATCATGGAGTGA 1548 0.4089 MERLEGRSKKDQEKKEKRTRNFVDLITGINNNTPKKAFVHHANDQNNNDVSIESPSPQFQSPRHVFEVPISDCESTESSNYNSCATTPQRAPQHGATTPQRAPQHGGKTSSPREEGGGYHYQWRNMIEGLRFKSVRRFSTIPLLATSYESSRRNLRNKLARIRTNEDDENDFNGAMDLDGITKPSWRNFSYEDLVAATDNFNPDNMIGKGGHAEVYKGRLPDGTVVAVKRLVKDEKEVGDKAGDFLSELGIIAHINHPNSTRLIGFGIDRGLYFVLQFASHGSLSSLLFGSECLEWKTRYKVALGVAKGLQYLHEECPRRIIHRDIKASNILLNQDDEAEISDFGLAKWLPDKWAHHVVFPIEGTFGYLAPEYFMHGLVDEKTDVFAFGVLLLELMTGRRAVDSNSRQSLVIWAKPLLDAKKVKEIADPRLEEQYDPTEMMLAMATASMCIHHMSSKRPYMSQVVLLLKGEEVAMDLTQKSIAPRSLLLDACDLEDYTCSSYLNDLNRHKELIME* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4591 515 ProSiteProfiles Protein kinase domain profile. 201 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4591 515 SUPERFAMILY Protein kinase-like (PK-like) 185 472 IPR011009 -
Tpr4g4591 515 ProSitePatterns Serine/Threonine protein kinases active-site signature. 321 333 IPR008271 GO:0004672|GO:0006468
Tpr4g4591 515 MobiDBLite consensus disorder prediction 1 22 - -
Tpr4g4591 515 Pfam Protein kinase domain 204 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4591 515 MobiDBLite consensus disorder prediction 79 107 - -
Tpr4g4591 515 Gene3D Phosphorylase Kinase; domain 1 175 276 - -
Tpr4g4591 515 PANTHER OS08G0249100 PROTEIN 102 515 - -
Tpr4g4591 515 PANTHER OS08G0249100 PROTEIN 1 93 - -
Tpr4g4591 515 MobiDBLite consensus disorder prediction 1 28 - -
Tpr4g4591 515 MobiDBLite consensus disorder prediction 79 118 - -
Tpr4g4591 515 Coils Coil 145 165 - -
Tpr4g4591 515 ProSitePatterns Protein kinases ATP-binding region signature. 207 229 IPR017441 GO:0005524
Tpr4g4591 515 SMART serkin_6 201 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4591 515 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 102 515 - -
Tpr4g4591 515 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 1 93 - -
Tpr4g4591 515 Gene3D Transferase(Phosphotransferase) domain 1 280 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4591 Tpr-Chr4 54189944 54194801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4591 189 464 Trihelix Transcription Factor Family AT1G68690 45.139 2.85e-69 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Tpr4g4591 Pkinase 3.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4591 - - gmx:100812793 667.151