Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4570 ATGGCGGAGCAACGAAACCGTTGGAGCTGGGACGTTACCGGCTTTGAACCATGGAAGTCATCCTCGCCGTCGCAGGCGTCGTCGTCGCCGTCAGAGCACGACGATCGGAAACCTAATGCGCCGTTAGTAAGGAGATACTCTATTTCGACTTCATCGGTTCTTCCGCACCATAAAATCACTACAGCTTCTAAGCTTCAACGGTTAAACGATAAAGTTAAGCTTGCTAGAGACGACTATTTGCAGTTAAGACAAGAAGCAAGTGAGCTTCAAGAATATTCAAATGCAAAACTTGATAGAGTTACACGATATCTTGGTGTTCTTGCTGAGAAAACCCGCAAGTTAGATCAAGTTGCCCTTGAAACTGAAGCAAGAATATCACCACTGATCAATGAGAAAAAGAGATTGTTCAATGATTTATTGACATCTAAAGGAAGCATTCGCATATTCTGTCGGACAAGGCCGTTATTTGAAGATGAAGGTCCTTCAGTTGTTGATTTTCCAGATGATCACACAATTCGTGTAAATACTGGTGATGATTCATTTGCTAACCCAAAAAAAGATTATGAGTTTGATAAAGTTTATGGTCCTCATGTTGGACAAGCTGAGTTATTCAGTGATGTCCAACCACTGGTGCAGTCAGCTTTGGATGGATATAATGTTTCCATATTTGCCTATGGTCAAACCCATTCCGGAAAAACACACACTATGGAAGGATCGAGCTATGATCGGGGTTTATATGCTCGGTGTTTTGAGGAGTTGTTTGATTTAGCCAACTTGGATACAACCTCCACTTCTCAATATAAATTTTGTGTTACAGTTTGTGAACTTTATAATGAACAGACTAGGGATCTACTTTTGGAGTCAGGGAAAAACATGCCAAAACTCGGCTTTGGATCGGCTGAATGTTCCGTAGAACTGGTGCAGGAAAATGTCGATAACCCTTTGGAATTCTCTACAGTTCTAAAAACTGCTTTTCAGAATCGGGGAAATGATTTATTAAAGATCAACGTATCTCATTTGATTGTCACAATACACATATTTTATAACAATTCGATCACTGGTGAGAATTCATATAGCAAACTTTATCTGGTTGACTTGGCTGGAAGTGAAGGTTCAATAACAGAAGACGATAGTGGTGAGCGTGTCACAGATTTGCTGCATGTTATGAAGTCACTTTCGGCGTTGGGAGATGTTTTGTTTTCTTTAACATCAAAGAAGGATATTGTTCCTTATGAAAATTCAGTGCTGACAAAACTTCTAGCAGATTCACTTGGTGGGAGTTCAAAAACTCTGACGATTGTGAATGTCTGTCCAAGTGTTTCAAATTTATCAGAAACATTGATGTCTCTCAATTTCTCTGCTAGAGCTCGAAATTCTGTCTTAAGTCTTGGAAACCGAGATACAATAAAAAAATGGAAAGATGTTGCCAGCGATGCCCGTAAGGAGTTGTATGAGAAGGAAAAAGAAATTCACGATCTAAAGCAAGAGGGTCTGGGACTCAAGCAAGCACTTAAAGATGCTAATGATCAGTGCGTTTTACTCTTCAATGAAGTGCAAAAGGCATGGAAAGTTTCCTCTGCATTGCAGACCGATTTAAAGTCAGAGCATATTTTGCTTTCAGATAAGTATAAGATTGAGAAAGAAGAAAGTACTCAGCTTAGAAATCAAGTTGCTCAGCTATTACAGTTAGAACAAGATCAAAAATTGCAGATACAACAGCAAGATTCAACCATCCAAAATTTGCAGGTTAAAATCAGAACCCTTGAAACTGAGCTCAGCGAAGCACTTGGATCCAGCAAAAGTAGTTCAACGTTTGTTTCAGAGACAGGGTCTGCAGCTCTATCTGATTCCAGAACAACTGGAGATGGCACCGTGGTAGCCAAAAAATTAGAAGAGGAACTCAAGAAACGTGATGCTCTGATTGAGAGGTTGCATGAAGAAAATGAGAAATTGTTTGATAGATTGACTGAGAAGAAAGCATCTGTGACTGGGTCACCTATGCCATCAAGTCCATTATCTCGTGAATCAGTAAATATTCAGCCTCAGAATACGACAAGGAATGGCACTAGCAACAACAAAGTAGCAAATTCTACACATGCTCCTTCTTCACCTTTGACTGCTGCTGCTAAGAATGATGGAACAGTTGCTTTGGTTAAATCTGGCTCTGAAATAGTCAAGACTACCCCTGCGGGTGAATATCTTACTACTGCCCTGAATGACTTTGACCCAGATCAATATGAAGGTCATGCTGCCATTTCTGATGGTGCAAACAAGCTTTTGATGCTGGTTCTGGCTGCTGTCATCAAAGCTGGTGCCTCTAGAGAACATGAGATACTTGCTGAAATCAGGGATGCTGTTTTCTCTTTTATTAGGAAAATGGAACCAAAGCGAGTAATGGACACCATGCTTGTTTCACGTGTTAGAATTCTGTATATAAGATCTTTACTTGCAAGGTCCCCGGAATTGCAATCAATTAAGGTCTTGCCCGTCGAGTGCTTTCTTGAGAAGGCTAATGCAGGCCGCAGTAGAAGTTCCAGCCGAGGGAATAGTCCTGGAAGGTCCCCTGTACAATATGTTGATGAGCAGATCCAGGGATTTAAAGTGAATTTAAAGCCAGAAAAGAAGTCCAAATTTTCATCCGTTGTGTTGAAGATTCGTGGGATTGATCAGGAAATCTGGAGACAGCAGGTGACTGGTGGGAAGCTTAGAGAAATTACTGAGGAAGCCAAAAGTTTTGCAATAGGTAACAAGGCTCTTGCTGCACTCTTTGTACATACTCCGGCAGGTGAGCTGCAGCGCCAAATTAGATCGTGGCTTGCAGAGAGCTTTGACTTTCTATCTGTTTCTGGAAATGATGCGTCTGGGGGGTCAACTGGTCAGTTAGAACTTCTTTCAACAGCGATTATGGATGGTTGGATGGCTGGACTTGGTGCTGCTCTGCCTCCACACACTGATGCCCTTGGCCAGCTATTATTTGAATATTCAAAACGTGTATATACTTCTCAGCTACAACACTTAAAGGATATTGCTGGTACCTTGGCAACAGAAGAGGCTGAAGATGCAGCACAAGTATCCAAGTTGCGTTCAGCTCTAGAATCTGTTGATCATAAAAGAAGGAAGATTCTGCAACAAATGAGAAGTGATGTAGCTTTATTGACATTGGAAAATGGGGGATCGCCTATCTCAAATCCTTCTACTGCAGCTGAAGATGCACGATTAGCATCTCTCATTTCACTCGATGGAATATTAAAGCAGATCAAGGATATAACCAGGCAATCTTCTGTGAACATCTTAAGCAAAAGTAAGAAAAGAGCATTGCTCGCTTCTCTTAATGAACTAAAAGAACAGATGCCTTCACTTCTTGAAATTGATCATCCATGTGCTGAGAGCCAGATTTCTGAAGCTTGCAGCATGGTTGAGTCAATTCCTGAAGAAGATGACCACAATCAAGATCTATCTCATGGTCGCAATCCATCAACAGATCTAGGCACCGGATCTGAAATTGACGTTGCACAGTGGAATGTGCTACAATTTAACACAGGCACTGCCACACCTTTTATAATAAAATGTGGAGCAAACTCAAATTCAGAACTAGTCATTAAAGCTGAAGCTCGAGTTCAAGAACCTAAAGGTGGTGAAATTGTGAGGGTTGCCCCTAGGCCCTCTGTTTTGGAAAATGTTAGCTTGGACGAAATGAAACAAATATTTTCTGAACTACCTGAGGCTCTAAGCTTGCTTGCCCTAGCAAGGACTGCAGATGGCACTCGAGCACGGTATTCTAGATTATATAGAACCTTGGCTTCTAAGGTTCCATCTCTTAGAGATTTGGTCAATGAACTCGAAAAAGGGGGTGCACTAAAAGATGTGAGAACATGA 3876 0.4128 MAEQRNRWSWDVTGFEPWKSSSPSQASSSPSEHDDRKPNAPLVRRYSISTSSVLPHHKITTASKLQRLNDKVKLARDDYLQLRQEASELQEYSNAKLDRVTRYLGVLAEKTRKLDQVALETEARISPLINEKKRLFNDLLTSKGSIRIFCRTRPLFEDEGPSVVDFPDDHTIRVNTGDDSFANPKKDYEFDKVYGPHVGQAELFSDVQPLVQSALDGYNVSIFAYGQTHSGKTHTMEGSSYDRGLYARCFEELFDLANLDTTSTSQYKFCVTVCELYNEQTRDLLLESGKNMPKLGFGSAECSVELVQENVDNPLEFSTVLKTAFQNRGNDLLKINVSHLIVTIHIFYNNSITGENSYSKLYLVDLAGSEGSITEDDSGERVTDLLHVMKSLSALGDVLFSLTSKKDIVPYENSVLTKLLADSLGGSSKTLTIVNVCPSVSNLSETLMSLNFSARARNSVLSLGNRDTIKKWKDVASDARKELYEKEKEIHDLKQEGLGLKQALKDANDQCVLLFNEVQKAWKVSSALQTDLKSEHILLSDKYKIEKEESTQLRNQVAQLLQLEQDQKLQIQQQDSTIQNLQVKIRTLETELSEALGSSKSSSTFVSETGSAALSDSRTTGDGTVVAKKLEEELKKRDALIERLHEENEKLFDRLTEKKASVTGSPMPSSPLSRESVNIQPQNTTRNGTSNNKVANSTHAPSSPLTAAAKNDGTVALVKSGSEIVKTTPAGEYLTTALNDFDPDQYEGHAAISDGANKLLMLVLAAVIKAGASREHEILAEIRDAVFSFIRKMEPKRVMDTMLVSRVRILYIRSLLARSPELQSIKVLPVECFLEKANAGRSRSSSRGNSPGRSPVQYVDEQIQGFKVNLKPEKKSKFSSVVLKIRGIDQEIWRQQVTGGKLREITEEAKSFAIGNKALAALFVHTPAGELQRQIRSWLAESFDFLSVSGNDASGGSTGQLELLSTAIMDGWMAGLGAALPPHTDALGQLLFEYSKRVYTSQLQHLKDIAGTLATEEAEDAAQVSKLRSALESVDHKRRKILQQMRSDVALLTLENGGSPISNPSTAAEDARLASLISLDGILKQIKDITRQSSVNILSKSKKRALLASLNELKEQMPSLLEIDHPCAESQISEACSMVESIPEEDDHNQDLSHGRNPSTDLGTGSEIDVAQWNVLQFNTGTATPFIIKCGANSNSELVIKAEARVQEPKGGEIVRVAPRPSVLENVSLDEMKQIFSELPEALSLLALARTADGTRARYSRLYRTLASKVPSLRDLVNELEKGGALKDVRT* 1292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4570 1291 MobiDBLite consensus disorder prediction 1 40 - -
Tpr4g4570 1291 MobiDBLite consensus disorder prediction 655 708 - -
Tpr4g4570 1291 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 1267 - -
Tpr4g4570 1291 Coils Coil 571 598 - -
Tpr4g4570 1291 ProSitePatterns Kinesin motor domain signature. 359 370 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tpr4g4570 1291 MobiDBLite consensus disorder prediction 599 622 - -
Tpr4g4570 1291 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 120 458 IPR027417 -
Tpr4g4570 1291 Coils Coil 627 661 - -
Tpr4g4570 1291 PANTHER KINESIN-LIKE PROTEIN KIN-14A-RELATED 2 1267 IPR030109 GO:0008017|GO:0009904
Tpr4g4570 1291 MobiDBLite consensus disorder prediction 662 708 - -
Tpr4g4570 1291 MobiDBLite consensus disorder prediction 15 29 - -
Tpr4g4570 1291 Pfam Kinesin motor domain 162 458 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g4570 1291 PRINTS Kinesin heavy chain signature 217 238 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g4570 1291 PRINTS Kinesin heavy chain signature 360 378 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g4570 1291 PRINTS Kinesin heavy chain signature 409 430 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g4570 1291 SMART kinesin_4 143 467 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g4570 1291 ProSiteProfiles Kinesin motor domain profile. 145 459 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g4570 1291 Coils Coil 65 92 - -
Tpr4g4570 1291 Coils Coil 543 563 - -
Tpr4g4570 1291 Coils Coil 469 510 - -
Tpr4g4570 1291 Gene3D Kinesin motor domain 90 459 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4570 Tpr-Chr4 53931715 53946411 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4570 132 460 Calmodulin-binding Proteins AT5G65930 36.657 1.28e-48 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4570 - - mtr:MTR_8g471180 2240.31