Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4529 ATGACGGTGGACGATATCGAGGGTCTTGATTTTAGTAGGGAAAAAGACGCTTATGGTTTCTATGTAAAGTATGCAAAATGCAATGGTTTCGTTGTTAGGAAAGATGTTGTGGTAAGAAATGTTAGTGGAATGATTATAACGCGGAGGTTTTTGTGCAACAGGGCGGGAGAAAGAGGCCAAAAACACTTGACTAGGGTTGACTGGAAAAGAGATCATAGAGTTGTCACCCGGATTAATTGTGAAGCCCACCTTCGTATACATTATAATGAAGAGAGATTGAGATGGGTAGTGACTTCTTTTGAAGTGTCCCATAACCATGAACTAATCTCATCTACACATATTCATTTATTTCTTGCCTACCGTGGAATGACTGATGCTGACAAAGCTCAGATTGACAGCCTACATTCAACCGGTATGCAAACATGTCATAGAATGGGTCACATGGTGGCAAACAAGGGTGGATATGAAGTTGTTGGTTTTATAAAAAAATATTTGTATAACTATTTTGGGAAAAAAAACAATCGTTGA 528 0.3864 MTVDDIEGLDFSREKDAYGFYVKYAKCNGFVVRKDVVVRNVSGMIITRRFLCNRAGERGQKHLTRVDWKRDHRVVTRINCEAHLRIHYNEERLRWVVTSFEVSHNHELISSTHIHLFLAYRGMTDADKAQIDSLHSTGMQTCHRMGHMVANKGGYEVVGFIKKYLYNYFGKKNNR* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4529 175 Pfam FAR1 DNA-binding domain 20 109 IPR004330 -
Tpr4g4529 175 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 4 134 - -
Tpr4g4529 175 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 4 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4529 Tpr-Chr4 53465482 53466009 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr4g4529 FAR1 1.6e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4529 - - ccaj:109792835 232.646