Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4524 ATGAATCTAGAGCTCCCAACACCATCAACCAATGAACCTCCCCAACAAAAATTCTCTCTTCCAGTTGATTCAGAAAACAAATCAACAGTCTTCAAAATACACTCAATAGCCAAACCTCACATGCTAGCATTCCATCTATCATGGTTCTCATTCTTTGCATGTTTTGTTTCAAGTTTTGCAGCAGCACCACTTGTTCCTATAATCCGCGACAACCTTAATCTAACAGCAACAGACATAGGAAATGCCGGTGTTGCATCTGTTTCTGGTGCTGTTTTTGCAAGAATTGCAATGGGAACAGCTTGTGATTTAGTTGGACCTCGTCTTGCTTCGGCTTCTCTTATTCTCTTAACTTCACCGGCTGTTTATTGTACTTCAATTATCAATTCTGCTACTAGTTTTCTTCTTGTAAGGTTCTTCACTGGTTTTTCTATAGCCACTTTTGTTTCTACTCAGTTTTGGATGAGTTCTATGTTTTCTACTACTGTTGTTGGCAGAGCAAATGGTTTTTCAGGTGGTTGGGGTAACCTTGGTGGAGGAGCTACACAACTCATCATGCCACTTGTATTTTCACTCATTCAAGATAATATTGGTTCAACAAAATTCACTGCATGGAGAATTGCATTTTTCATACCAGCTTTGTTACAATCTTTGACAGCATTTTCAATTTTAATATTTGGTCAAGATTTACCAGATGGAAATTTTCATGGTTTAAAAAAATCAGGTGAAAAAGCCAAAGATGAATTTTCAAAAGTACTTTATCATGGTGTGTTAAATTATAGAGGTTGGATTTTAGCTTTAACTTATGGTTATTGTTTTGGTGTGGAGTTGACCGTTGACAATATCATAGCTGAATATTTTTATGACAAGTTTAACCTTAAACTTCATACTGCTGGAATTATTGCTGCAAGTTTTGGTTTGGCTAATGCTTTTTCTAGACCTGGAGGAGGTTTAATTTCTGATTTAATGGCTAAGAGATTTGGAATGAGGGGTAGATTATGGTGTTTGTGGATTTGTCAAACTTTGGCTGGTGTTTTTTGTGTGATTTTGGGACTTGTTGGAAGTTTAAGTGTTTCTATTGTTGTTATGATTATATTCTCTGTTTTTGTTCAAGCTGCTTGTGGAATGACTTTTGGGATTGTTCCTTTTGTCTCAAGAAGGTCCTTAGGGGTTATATCAGGAATGGCAGGAGGAGGAGGAAACGTTGGAGCAGTAATAACCCAACTAATATTCTTCAAAGGATCAAGATTTTCAAAAGAAAGAGGAATAACACTAATGGGTGCAATGATCATAATATGCACATTACCATTATTCTTAATTTATTTTCCACAATGGGGTGGCATGTTATTTGGTCCATCATCATTTAAAAATGTTTCAGAAGAAGATTATTACTTGTCTGAATGGAACTCAAAAGAAAGAGAAAAAGGGTCTCATCATGGTAGCTTGAAATTTGCTGATAATAGTAGAAGTGAAAGAGGTGGAAAATTGAATATTTCAACTAGGCCTTCTGAAGATACTACACCACCACAAAATGTTTGA 1536 0.36 MNLELPTPSTNEPPQQKFSLPVDSENKSTVFKIHSIAKPHMLAFHLSWFSFFACFVSSFAAAPLVPIIRDNLNLTATDIGNAGVASVSGAVFARIAMGTACDLVGPRLASASLILLTSPAVYCTSIINSATSFLLVRFFTGFSIATFVSTQFWMSSMFSTTVVGRANGFSGGWGNLGGGATQLIMPLVFSLIQDNIGSTKFTAWRIAFFIPALLQSLTAFSILIFGQDLPDGNFHGLKKSGEKAKDEFSKVLYHGVLNYRGWILALTYGYCFGVELTVDNIIAEYFYDKFNLKLHTAGIIAASFGLANAFSRPGGGLISDLMAKRFGMRGRLWCLWICQTLAGVFCVILGLVGSLSVSIVVMIIFSVFVQAACGMTFGIVPFVSRRSLGVISGMAGGGGNVGAVITQLIFFKGSRFSKERGITLMGAMIIICTLPLFLIYFPQWGGMLFGPSSFKNVSEEDYYLSEWNSKEREKGSHHGSLKFADNSRSERGGKLNISTRPSEDTTPPQNV* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4524 511 MobiDBLite consensus disorder prediction 491 511 - -
Tpr4g4524 511 SUPERFAMILY MFS general substrate transporter 36 440 IPR036259 -
Tpr4g4524 511 MobiDBLite consensus disorder prediction 470 489 - -
Tpr4g4524 511 Gene3D MFS general substrate transporter like domains 35 233 IPR036259 -
Tpr4g4524 511 CDD MFS_NRT2_like 44 438 IPR044772 GO:0015112
Tpr4g4524 511 PANTHER HIGH AFFINITY NITRATE TRANSPORTER-RELATED 10 495 - -
Tpr4g4524 511 MobiDBLite consensus disorder prediction 470 511 - -
Tpr4g4524 511 Pfam Major Facilitator Superfamily 48 405 IPR011701 GO:0022857|GO:0055085
Tpr4g4524 511 ProSiteProfiles Major facilitator superfamily (MFS) profile. 43 444 IPR020846 GO:0022857
Tpr4g4524 511 Gene3D MFS general substrate transporter like domains 243 445 IPR036259 -
Tpr4g4524 511 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 10 495 IPR044772 GO:0015112
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4524 Tpr-Chr4 53405643 53409555 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4524 16 510 Inorganic Solute Cotransporters AT1G12940 70.303 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4524 K02575 - gmx:100787888 813.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4524 4 53405643 53409555 Tpr4g4524 4 53405643 53409555 ECH