Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4517 ATGGTAACAGAATTAAGCACAATGCATAATCACATTCATGAATACCCTCTTCCTTGTTTATATTGTCATCCACATAGCTATATTAGGATGGTTCATAATCTCATAGAGAGATGCTTGATCTTTCAAATGAGTCAAGACCAATGCATAAAGACATTATCAGAACATGCAGGGATTGAGCCACTTGTTACTCTTACAGTGTGGAGAGAGTTGCAAAAGGAGAATGAGGAGTTCTTTAGAGCATACTTGCAACAAAATATACCTCAGAGGCCATTCATGAGTAGTCATTTTCAAAGGGGAGAAGAATTATCAAGAAGGAAATATTGGGAATGA 330 0.3667 MVTELSTMHNHIHEYPLPCLYCHPHSYIRMVHNLIERCLIFQMSQDQCIKTLSEHAGIEPLVTLTVWRELQKENEEFFRAYLQQNIPQRPFMSSHFQRGEELSRRKYWE* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4517 109 PANTHER OS02G0137100 PROTEIN 10 100 IPR006476 -
Tpr4g4517 109 TIGRFAM A_thal_3526: uncharacterized plant-specific domain TIGR01589 28 83 IPR006476 -
Tpr4g4517 109 Pfam Plant protein 1589 of unknown function (A_thal_3526) 31 81 IPR006476 -
Tpr4g4517 109 PANTHER - 10 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4517 Tpr-Chr4 53329313 53332283 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4517 - - lja:Lj0g3v0326379.1 165.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4517 4 53329313 53332283 Tpr4g4517 4 53329313 53332283 ECH
Tpr2g1368 2 15932881 15935402 Tpr4g4517 4 53329313 53332283 PCT