Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4507 ATGAGGAGTGGAAATAGGAAGCTGCATTTAAGCAAGATCTATTCATTTACATGTTTTAAAGCGAGTTCGGTTGATGGAGATCATTCACAGATTGGAGGTAAAGGTTATTCGAGGGTGGTTTTCTGCAATGAACAAGATAGTACTGCTGCTGCTACGACTACTGCTACTGCCGAGGAAGCTGTGATTTTGAATTTTGCAGATAATTCAGTTAGATCTACAAAATATACTGCTGCTACTTTCCTTCCAAAATCACTTTTTGAACAGTTTAGAAGAGTTGCTAATTTCTATTTTTTAGTTACTGGTGTTTTGGCTTTCACTAAACTTGCTCCTTATAGAGCTGTTACTGCTATTCTTCCTCTTGTTGTTGTTATTGGAGCATCTATTGTGAAAGAAGGTATTGAAGATTGGCGTAGGAAAAAGCAGGATATTGAGGTGAACAATAGAAGAGTTAAAGTTCATAAAGTTGATGGCATTTTTGAATATACTGCATGGAAGAATCTGAGGGTAGGGAACATAGTGAAGGTAGAGAAGGACGAGTTCTTCCCGGCTGATCTTGTATTGCTTTCATCCAGTTATGAGGATGCAGTCTGCTACGTTGAGACCATGAACTTGGATGGTGAGACAAATTTGAAGTTAAAACAAGGTTTAGAGGTAACTTCTTTCTTACATGATGATCTCAACTTCAAAAAATTTAAAGCTACCGTCAAATGTGAAGATCCAAATGCAAATTTGTATTCGTTTGTTGGAAGCATGGAGTTTGAAGAGCAAAAGTATCCCCTTTCTTTTCAGCAACTTCTTCTGCGAGACTCTAAACTTCGTAATACAGACTATATTTTTGGAGCTGTTATCTTCACTGGCCATGACACTAAGGTTATTCAGAATTCTACCGACCCGCCTTCGAAAAGAAGCCGGGTTGAAAAGAAGATGGATAGAGTCATCTACTTCTTGTTTTGTATTTTGTTTCTAATGGCATCTGTAGGATCTATTTTCTTCGGCTTTATAACTAAAAACGACTTGCAAGGTGGTTCAGTGAAAAGATGGTATTTGAGGCCTGATCATTCGTCAATATTCTTTGATCCGAAAAGATCGGCTGCTGCTGCTGCATATCATTGTTTGACCGCATTAATGTTATACGGCTTCTTTATTCCGATCTCTTTGTATGTGTCAATAGAAATTGTCAAAGTCCTTCAGAGCATTTTCATCAATCAAGATATTCATATGTACTATAAGGAAGCAGACAAACCAGCACATGCTCGCACTTCAAACTTGAACGAGGAGCTTGGTCAAGTTGACACAATACTTTCTGATAAAACTGGAACTTTGACCTGCAACTCAATGGAATTCATTAAATGTTCGATCGCTGGTGTAGCTTATGGCCGTGGTGTTACGGAGGTTGAGAAGACCATGAGTAGAAGAAAAAGTTCAACTTTAGTTCGTGAGCGTGATATATCAGAAGAAAATGACATCAGGGCTTCTCTTGATAAAAAATCTGCCATAAAAGGTTTTAACTTCACCGATGAAAGAATAATGAATGGTAATTGGGTTAATGAGCCTCATGCAGATGTTATCGAGAAGTTTTTTCGCCTATTGGCAGTCTGTCATACAGCCATACCGGAAGCAGATAAAGACACTGGAAATGTGTCGTACGAGGCTGAATCTCCTGATGAAGCAGCATTTGTTATTGCGGCAAGAGAACTTGGTTTTGAATTCTACAAAAGGGCTCAGACTAGTTTATCAACATACGAGTTGGATCCAGTTTCGGGCAATAAAGTTGAAAGGATGTACAAGATTCTCAATGTTTTAGAATTCAATAGCTCAAGGAAGAGAATGTCAGTAATAGTAAAAGGCAATGACGGAAAAATTCTACTACTATGCAAAGGTGCCGACAGTGTCATGTTTGAAAGACTTGCTAAGAATGGTAGGGAATTTGAAGAGAAAACCATGGAACATGTGCATGAATACGCTGATGCAGGTCTAAGAACCCTTATACTCGCGTATCGTGAACTTGAAGCAGAAGAGTACAAGGATTTTGCAAACAAATTCTCTGAGGCCAAGAATTTAATTAGTGCGGACCGGGAAAGATCGATTGAAGAAGTGTCGGATAATATTGAGAAGAACCTAATCCTTCTTGGTGCCACTGCTGTTGAGGATAAGCTCCAAAATGGGGTTCCTGATTGCATTGACAAGCTTGCTCAAGCAGGAATTAAGATTTGGGTTTTAACCGGGGATAAAATGGAGACTGCAATCAATATTGGCTTCGCTTGTAGTTTGCTTAGACAAGGAATGAAACAGATTATAATTCATTTGGATACTCCAGAAATCCAAGCACTGGAGAAGGATGGGGACAAGATAGCTATTACCAAGACATCAAGGCAGAGTGTCCTCTTTCAGATACGTGAAGGTGCTGCACAGCTTACTGCACACAGAGGAAGCTCTCAGCAAGCATTTGCTCTAATCATTGATGGCAAATCACTTGCTTATGCACTTGAGGATGATATGAAGAACATGTTTCTTGAGCTTGCAATTCGTTGTGCATCTGTTATTTGCTGTCGCTCATCGCCAAAGCAGAAGGCGCTGGTCACTAGATTGGTCAAATCTGGAACCGGGAAAACAACATTAGCTATCGGCGATGGAGCTAATGATGTGGGAATGCTTCAAGAAGCTGATATTGGGGTTGGTATAAGTGGTGTTGAAGGAATGCAGGTGCTGTGTAAATTAATGCAATATTCATGCCTTTTTAAATTCATTTTTACTTTTACATGCTTTATTCTAAACATATTCTTTCTTTTCCTCCTAATCCCACAGGCCGTTATGTCTAGTGATATTGCAATTGCACAATTCCGGTATTTGGAACGATTACTTCTCGTGCATGGCCATTGGTGTTACCGAAGGATCTCATCAATGATATGCTATTTTTTCTACAAGAATGTCACATTTGGTTTCACTCTATTCTTGTATGAGGTGTATGCATCATTCTCTGGAGAACCTGCATACAACGACTGGTTTTTAGCTCTCTATAATGTCTTCTTTTCATCACTTCCTGTGATTGCTCTCGGTGTATTCGACCAGGACGTTTCTGCTCGGTACTGTCTCAAGTTTCCTTTGTTATATCAAGAAGGAGTAGAAAATATCCTTTTCAGCTGGCGTCGAGTACTCAGTTGGATGCTTAACGGATTCTTCAGTGCCTTATTAATTTTTTTCTTCTGCACCAAAGCAATGGAGATACAAGCCTTCGATTCGGAGGGAAGAACCGCTGGAAGAGAAATACTAGGAGCAACCATGTACACTTGTGTAGTTTGGGTTGTAAACTTGCAAATGGCACTATCTATAAGTTACTTCACCTTGATCCAACATATTTTCATCTGGGGTTCCATTTTTATCTGGTACATTTTTCTCCTAATATATGGAGCAGTGCCTCAAAAGATTTCGGAAAACGCTTACAAAGTCTTCGTTGAATCTCTTGCTCCTTCGCCTTCGTATTGGATAGTAACATTATTTGTGGTGATCTCAACCCTTATACCATACTTCTCATACAATGCAATTCAGATGCGGTTCTTTCCAATGTATCACGAAATGGTACAGTGGATAAGGTACGAAGGGAAGACTGAGGATCCTGACTACTGTAATATGGTGCGGCAAAGATCGTTGCAGCCAACGACCGTTGGTTCAACTGCTCGCTTAGCTGCCAAGGCAAACCAATCGTTAGACAAAAATATTAAACGTAGATAA 3729 0.3961 MRSGNRKLHLSKIYSFTCFKASSVDGDHSQIGGKGYSRVVFCNEQDSTAAATTTATAEEAVILNFADNSVRSTKYTAATFLPKSLFEQFRRVANFYFLVTGVLAFTKLAPYRAVTAILPLVVVIGASIVKEGIEDWRRKKQDIEVNNRRVKVHKVDGIFEYTAWKNLRVGNIVKVEKDEFFPADLVLLSSSYEDAVCYVETMNLDGETNLKLKQGLEVTSFLHDDLNFKKFKATVKCEDPNANLYSFVGSMEFEEQKYPLSFQQLLLRDSKLRNTDYIFGAVIFTGHDTKVIQNSTDPPSKRSRVEKKMDRVIYFLFCILFLMASVGSIFFGFITKNDLQGGSVKRWYLRPDHSSIFFDPKRSAAAAAYHCLTALMLYGFFIPISLYVSIEIVKVLQSIFINQDIHMYYKEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVEKTMSRRKSSTLVRERDISEENDIRASLDKKSAIKGFNFTDERIMNGNWVNEPHADVIEKFFRLLAVCHTAIPEADKDTGNVSYEAESPDEAAFVIAARELGFEFYKRAQTSLSTYELDPVSGNKVERMYKILNVLEFNSSRKRMSVIVKGNDGKILLLCKGADSVMFERLAKNGREFEEKTMEHVHEYADAGLRTLILAYRELEAEEYKDFANKFSEAKNLISADRERSIEEVSDNIEKNLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIIHLDTPEIQALEKDGDKIAITKTSRQSVLFQIREGAAQLTAHRGSSQQAFALIIDGKSLAYALEDDMKNMFLELAIRCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQVLCKLMQYSCLFKFIFTFTCFILNIFFLFLLIPQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNVTFGFTLFLYEVYASFSGEPAYNDWFLALYNVFFSSLPVIALGVFDQDVSARYCLKFPLLYQEGVENILFSWRRVLSWMLNGFFSALLIFFFCTKAMEIQAFDSEGRTAGREILGATMYTCVVWVVNLQMALSISYFTLIQHIFIWGSIFIWYIFLLIYGAVPQKISENAYKVFVESLAPSPSYWIVTLFVVISTLIPYFSYNAIQMRFFPMYHEMVQWIRYEGKTEDPDYCNMVRQRSLQPTTVGSTARLAAKANQSLDKNIKRR* 1243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4507 1242 Pfam Phospholipid-translocating ATPase N-terminal 63 117 IPR032631 -
Tpr4g4507 1242 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 935 1237 - -
Tpr4g4507 1242 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 4 903 - -
Tpr4g4507 1242 SFLD Haloacid Dehalogenase 416 960 - -
Tpr4g4507 1242 PRINTS P-type cation-transporting ATPase superfamily signature 434 448 - -
Tpr4g4507 1242 PRINTS P-type cation-transporting ATPase superfamily signature 875 894 - -
Tpr4g4507 1242 SFLD p-type atpase 416 960 IPR044492 -
Tpr4g4507 1242 CDD P-type_ATPase_APLT_Dnf-like 67 1069 - -
Tpr4g4507 1242 Pfam Cation transport ATPase (P-type) 533 636 - -
Tpr4g4507 1242 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 4 903 - -
Tpr4g4507 1242 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 935 1237 - -
Tpr4g4507 1242 Gene3D - 556 710 IPR023299 GO:0000166
Tpr4g4507 1242 SUPERFAMILY HAD-like 422 901 IPR036412 -
Tpr4g4507 1242 ProSitePatterns E1-E2 ATPases phosphorylation site. 436 442 IPR018303 -
Tpr4g4507 1242 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 509 712 IPR023299 GO:0000166
Tpr4g4507 1242 Pfam Phospholipid-translocating P-type ATPase C-terminal 937 1187 IPR032630 -
Tpr4g4507 1242 SUPERFAMILY Calcium ATPase, transduction domain A 151 293 IPR008250 -
Tpr4g4507 1242 Gene3D - 129 296 - -
Tpr4g4507 1242 Gene3D - 711 911 IPR023214 -
Tpr4g4507 1242 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 65 902 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Tpr4g4507 1242 SUPERFAMILY Calcium ATPase, transmembrane domain M 63 1187 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4507 Tpr-Chr4 53067672 53076279 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4507 8 1230 Primary Pumps ATPases AT1G68710 72.089 0.0 1872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4507 K01530 - gmx:100781421 2024.21