Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4504 ATGCAAACTGAGGCGGAAATCTTGACTGATTTGAGTACTCAACTTCATTCTGAGACCGTTGTTTCTGTTCAAAACGAGGATCCTGTTGTTTCAACATCTCTTGCAAATGTTGCCGTCTTGCCTCAGCAGCCAGCTCCAAAGAAACCAACACGACAATGGGCTGCTTGGACTCGTCAAGAAGAGGAAAGCTTCTTCACCGCATTACGACAAGTTGGGAAGAATTTTGAGAAAATCACTTCACGTGTACAAAGTAAAAACAAGGATCAGGTTAGGCATTATTACTATCGGCTTGTGAGACGGATGAACAAACTTCTCGGTCCAGAATTATGTCTGGATGCCAAAAATTCAAAAGATACCAATGCTGCAATGCTTCGTTGGTGGTCTTTATTGGAAAAGTATAGATTTAAAGCTTCAAAGCTTCACCTAAAGCCCCGACGGTTTAAAATATTTTTAGAAGCCTTGGAGCACCAACTTTTGAAGGACCGGAAGAAGAATGTAAGGAAGCGACCTTTGCAGGGTGGAAATTGTCAACCTCCTGTTCTTAACACTGTCTCAAATCAAGCCAGAGCATCAGGAAATGATACCCGTGCAGTTAAAATGATTCTTGTCGAGAGTCAAAATATTATAAAACTTGGACCTTCCAAACCACCATTGAAACGCAATGTGAGCATGGGTGTTAACCGTAATAATGCTAAGGGAGATTCAAATAACTCAAAACCTACGAGGCAGAGAAAGAAATCTGGTATGGCCACAGCAGCTGCATATAGAAAATGGGAGAAGGCTGCAATTGCTGGAGTCTCTTTAGTTGCAGATGCTGCTGAGCATTTGGAGCGAGCTGCTACTGTTAAAGAGGTTGAACATGACCAGGAGAATCCAGGGGAAAACTGTTCTGATCCTGTTGATCATGTCCTGCCCTCTTTATCCACACTTCCACAAAATCACTCTGTTGATAACAATGTGCAGAATATTGTGAAACTTAAGCTCCAATTATTCCCAATTGATGAACTCACTCGAAGAGCCTTGGAATTGGATAAACATAATCCATACTTGGAGCTTACACTTAGTACACGAAAGAAGATATCATCAATTTTAGAACATCTAAACCGTAAATGGGGCAATACAAGCATAGCAGTTGGAGAGTTGATGCTTTTTCCTTATGGTGTTCAAAAGGAAAATTTGAATACTTATCAAAGATGGAACCAGGAATCTACTCTTAGTGCGGCAGATATATATGCAGCGATAGGAAGTCCACCTTTATTCCGTTTGAGGTATGGTTGGTTCTCTAATACTGAGCACGGGACATTAAATATGCAAGCACCTGTAACATCCAGCTGCACGGTTAGACAATCCAAAAATGGTGGTGATAATATGAAGGATCAGGTTGTGAATTCGGCATCACTTCCTAAGCCATCAACTAATAATTACTCCACGGAGCGCTCTGTAGACTGTGAAACATCCATGAACATAAACGGTGCTCTTACCTCTACTTCAACCTATTTACCCAACACTAGAGATGGCGGTATCTACCAGAATACAAGCACCGAGGAACCTTGTGGACCTACAGCTCATATTTCATTGCATGTAAAAGATGTTACAAATGGAGCTATAGCTAGACAGTTGGAAGACATGGATGTGTTGAAATCAAACAGTGGATCGGGCCTGTCAGCTGGTGAGTGGGCTGACAGCCTTACCAACATTAGTGTGGGGGACCTACTTTCAGGAGTGTCCCAGGATCTCAATTATAATTGCATGGATCCTCTTATTGCTGATAATTGTCGCAGTGCTCATCAAATTCCTTTTACTAGTGATTCTTTTGATGCTGCTATTGCCGCTCACATATCTAGACACCACGACAAAATGGGACAATCAACTCTGGTATCTCCTATGTCGTCCATCTGGGATGCTGAAGAAACACGTGATGCTTTCTCATTTAAAAAGGATGTTATTCATCATGATGATGGTCCTTGTTTATCTCTCTCTGCTTCTTTAGATTTTGATAAAAAGGTTCCGGAAAGAAGCTTTGAAAATTTGAATAAGCTTTCACTTGAAAAAGAGAGCCTTGTGGATGATGTTGCTCAAACAGACCCTATGCCTATGGACAATTGTGAGTCCAGTGCAGATATCAAGTATCATTTAGCAAAGGATTTTAATGGGCTTGCAGATATGTATTGGCCGGATTCTTTGGGACCGCTGGATTTGGAAATACCATCTAATAAGTACCACAGCGATGATCCGATTTTAAGTGATAGTGGACTGAATCGCTTGATAGCCAATAGCCTGGATGCATTCCAGAATTGCTCCTTTTTTGGGATTGACAAGAAGGAAACACCATCAACAGTTGAGGCTCAAAAAACTGCCACTCTTTCAGATTTTAAAATTGGAAGTGGTATTTGA 2394 0.4123 MQTEAEILTDLSTQLHSETVVSVQNEDPVVSTSLANVAVLPQQPAPKKPTRQWAAWTRQEEESFFTALRQVGKNFEKITSRVQSKNKDQVRHYYYRLVRRMNKLLGPELCLDAKNSKDTNAAMLRWWSLLEKYRFKASKLHLKPRRFKIFLEALEHQLLKDRKKNVRKRPLQGGNCQPPVLNTVSNQARASGNDTRAVKMILVESQNIIKLGPSKPPLKRNVSMGVNRNNAKGDSNNSKPTRQRKKSGMATAAAYRKWEKAAIAGVSLVADAAEHLERAATVKEVEHDQENPGENCSDPVDHVLPSLSTLPQNHSVDNNVQNIVKLKLQLFPIDELTRRALELDKHNPYLELTLSTRKKISSILEHLNRKWGNTSIAVGELMLFPYGVQKENLNTYQRWNQESTLSAADIYAAIGSPPLFRLRYGWFSNTEHGTLNMQAPVTSSCTVRQSKNGGDNMKDQVVNSASLPKPSTNNYSTERSVDCETSMNINGALTSTSTYLPNTRDGGIYQNTSTEEPCGPTAHISLHVKDVTNGAIARQLEDMDVLKSNSGSGLSAGEWADSLTNISVGDLLSGVSQDLNYNCMDPLIADNCRSAHQIPFTSDSFDAAIAAHISRHHDKMGQSTLVSPMSSIWDAEETRDAFSFKKDVIHHDDGPCLSLSASLDFDKKVPERSFENLNKLSLEKESLVDDVAQTDPMPMDNCESSADIKYHLAKDFNGLADMYWPDSLGPLDLEIPSNKYHSDDPILSDSGLNRLIANSLDAFQNCSFFGIDKKETPSTVEAQKTATLSDFKIGSGI* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4504 797 ProSiteProfiles Myb-like domain profile. 48 98 IPR001005 -
Tpr4g4504 797 CDD SANT 55 98 IPR001005 -
Tpr4g4504 797 MobiDBLite consensus disorder prediction 223 245 - -
Tpr4g4504 797 SMART sant 52 100 IPR001005 -
Tpr4g4504 797 PANTHER CRAMPED PROTEIN 42 762 - -
Tpr4g4504 797 SUPERFAMILY Homeodomain-like 48 102 IPR009057 -
Tpr4g4504 797 Gene3D - 2 105 - -
Tpr4g4504 797 MobiDBLite consensus disorder prediction 221 250 - -
Tpr4g4504 797 ProSiteProfiles SANT domain profile. 56 102 IPR017884 -
Tpr4g4504 797 Pfam Myb-like DNA-binding domain 55 97 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4504 Tpr-Chr4 53018093 53025051 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Tpr4g4504 Myb_DNA-binding 5.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4504 - - aprc:113857455 1213.75