Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4499 ATGTCCGTGAGAGTTCCTCTTCATGGCTGGAACTACGACTACGATGTGTTCTTGAGTTACCATGACAAAGCCTTATGTAAACCTTTTGCAGCAGCACTGTATTCAGCTCTCACACAGGCTGGACTTGTTGTTTACATTAACCATAACAATCTTCCAACCGGAGATCAGACAAATTTCTCAGCAATCGAAGCTTCTAGAACTTGTATCATCATTTTCTCAAGTAGTTTTGATGCTTCAAAATGGTTTCTAGAAGAACTGGAGAAGATACTGGATTGTCGTGCAAACATAGGACAGGTGGTTGTGCCTGTTTATTATAATGTACAAGACTACCATGTACGCAGTCAGAAAGAAAGTTTTGGAAAAGCAAAGTCAATGCGATATAGAGCCGCGCTCTCTGGAGTTAGCAACATGCTAGGATTTTTGCCATGGAATTTCAGGGACGAAAGGGAAGGTATCAATAACATAGTACACGATTTGACTCGTTTCATAGAAGACAAATTCTTTTTCGTTGATAAACACCTAGTGGGATTAGAAGCTCGTCTGCAAGATGTTATTCAACTATTGAGCAAGAAACAATCACAAGATACCATAATTCTGGGGATATGGGGGATAAACGGGATTGGTAAAACAATCATTGCAAAAGCCATTTATAATCAAATGGGTAGCAGTTTTAAGGGCCAGTGCTTCCTTCACCTAAATGTTAATAAATATTTCCAACATAGAAATGACCAAGTTTCTTTACAACGACAACTTCTTTCCAACATCTACAAAACAACAGAGATACAGATTGATACAGTTGAATCAGGAAAAATGGTATTGCATAAAAGCCTTCACCGTACAAAGATATTTCTTGTACTTGACAATGTGAATAACTTGGAACAGTTGAATGCTTTGTGCGGTAGTCGTGAATGGTTTGGTCGTGGAAGTAGAATAATTATCACAACAAGAGATAGAGATATACTTCGTAAGTTTGAAGTTGATCATACATATAGAATAAAATATATGAACTCTACTGAATCTCTTGAACTTTTTAATCGGCATGCATTCAAAACTCTGAGGCCTATAGAAAGTTACACTGACCTTTGTCGAGATGTTGTTGAGTACTGTGGTGGATTTCCGCTAGCTCTTGAAGAAATTGGGTCTTCTTTGTTCGGTAGATCTGTAGCGGAATGGCAGATTGTACTGGAGAAACTCAAAACCAATGGAAACCATGTCGTAATGGAGAAACTGAGAATAGGTTTTGATGATTTACAACATGAGGAGAAAGAAATTTTCCTTAAGATAGCTACTTTATTTATTGGGATGGATAAAGATGATGTAATTCAGACTTTAAATTATGCTGGCCATCAACCCGATATTGGACTAAGAGTCCTTGTAGACAAAAGCCTTGTGACTATAGATAGCAAGAACAGGATTGGAATGCATACTTTGGTACGAGCAATGGGAGGCGAAATCACAAGGCAACGGTCAAGGGGTATGGCTGAGACGAAGATGTACGATGTGTTCTTGAGTTTTAGAGGAGAAGACAGTCGCGCCAAATTCATTTCACATGTCCATTCGTCTCTTCAAAGTTCTGGGATTTATGTTTTCAAAGACGAGGATGGGATTCAACGAGGAGATCAGATCACAGTCTCATTGTTGCAAGCAATCGGACAGTCTAAAATTGCTATTGTCGTTTTGTCAAGAAATTATGCTAATTCAAAATGGTGCTTGCTGGAGTTGGAAAGAATTGTGGAAATGGGCAGAACCAATGGTACGTTGGTTCTACCAGTGTTCTATGAGGTAGATCCCTCAGAAGTACGTTATCAGACAGGAGAGATTGGAAAAGCTTTTGAATATCTTATATCAACAATATCAGTGGATGAATACACAAAGAGGAAATGGAAAACAGCACTCCAAGAAGTTGGTGGCCGAGCAGGGGTTGTCATCATAAATTCCAGGAATGAAAGTGAGGATATCAAGAAAATAGTTGAACTTGTTACTCGTTTGCTAGACAAGACAGAATTGTTTGTTGCTGACCATCCGGTGGGAGTAGAGTCACGTGTACAAGACGTTATTCAACTATTGAACAGCCAAAAATCAAAAGATCCTCTACTACTAGGGATATGGGGCATGGGAGGGATCGGAAAAACAACCCTTGCTAAAGCAGTTTACAATAAAATTCGTCATGATTTTGACGGAAAGAGCTTCCTGTTCAATGTCAGGGAAGTATGGAAACTAGATAATGACAAAGTTTCTTTACAACAACGACTTCTTTCAGACATCTACAAAACTACAAAGATAAAGATAGACACTGTTGAATCTGGAAAAATGATATTACAGAAAAGACTTTGTGAGAAAAGGATATTTCTTGTAATTGATGATGTGAATCATTTGGATCAATTGAATGCTTTGTGTGGAAATCGGAAATGGTTTGGTGAGGGAAGTAGAATAATCATCACAACAAGAGATGATGATTTACTAAGTAGGCTTGAAGTTGACCATGTATACAGAATGAAGGAAATGGATGACAATGAATCGCTCGAGCTTTTTAATTGGCATGCATTCAAGCAACCAATTCCAAGCAAAGGTTTTACTAACCTTTCGAGGGATGTTGTTAAGTACTCTGGTGGACTGCCATTAGCTCTTCAAGTAATCGGGTCCTTTTTGTTGACTAGGAAAAGGGAAACTGAGTGGAATAGCGTACTGGAGAAACTCAAACTGATTCCAAATGATGAAGTGTCTGAGAAGCTCAGAATAAGTTTTGATGGTTTAATTGATGATGACATGAAAGATATATTCCTTGATATTGCTTTTTTCTTTATTGGTATGGACCGGCAAGACGTAACTGAGATATTAAAAGACTGTGGGCATTTTCCAGAAATTGGAATAAGTGTCCTCGTACAACAAAGCCTTGTAACTGTTGATAGAAAAAACAAGATTGGAATGCATGATTTGTTACGAGACATGGGAAGAGAGATCATTCGTAAGAAATCTAAAGAGGGAGGCAAGGAGCCAAGTAGATTATGGCGTTACGAGGATGTGCTTGAGTTGCCAAAAGATACCAGTACTTTAGATGTTAAGGGATTGACTTTAAAGATGTCAAGAATGGACTCAACAACTTATTTGGAAACCAAAGCATTTGAGAAGATGGACAAGCTTAGATTGTTTCAACTTTCTGGCGTACAACTAGATGGAGATTACAAATATCTTCCAAGACATCTTAGGTGGCTTAGTTGGCATGGATTCCCTTTAAAGTGTACACCTTCAGACTTTCATCAACAAAGTCTAGTTGCCGTTGAATTCAAATATTCCAAGCTCGAACGAGTGTGGAGGAAGTCTCAGTTGCTGGTGAAGCTGAAAATTCTTAATCTTAGTCATTCTCATAACTTGAGACATACCCCAAACTTTTCGAACTTGCCAAATCTTGAAAAGTTAATACTTAAAGATTGTCCAAGTTTGTCTTCGGTTTCTTCTAATATAGGACAGCTTAAAAAAATTCTGTTAATAAATTTGAAAGATTGTACAGGCCTTCATGAACTTCCAAGGAGCATCTATAAGTTAGACTCGCTCAAAACTCTCATTCTGTCTGGATGTACAAAAATTGACAAGTTGGAAGAGGATATAGAACAAATGATATCTTTAACCACCCTGGTTGCGGATAACACTGCTATAGCAAAAGTTCCCTTTGCAGTAGTAAGATCAAAAAGCATTGCATATATTTCCCTCTGTGGCTATGAAGGATTTGCGCGTAAAGTGTTTCCTTCTATTATCCAGTCTTGGTTATCTCCAACAAATAGTATCCTATCCTTAGTTCAAACATTTGCAGGAACTTCATGTCTTGATATCACAGATGAACAAAATAACAGTTTCTATTGTCTATCATCAATTTTTGAAGACCTTCAGAATCTTCAACGTCTTTGGTTGAAATGTGATTCAGAAGCTCAATTAAATCAAACTGTAGCTAGTATTTTGGATAGCTCCAACACACGGAATTGTGAGGGATTCTCGACTTCAGCATCAATTCATTCCCATAGTCAAGTTTGTATGTCAAGCTCTAAAAATTCCTTGACATCCTTTTTGATTCAAATGGGAGTGAGCTGCAATGTCGCCAACATTCTTAGAGAAAGTATTTTGCAGAAAATGCCTCCCATTGGGACTGGTTTCCTCCCAGGTGACAATTATCCCAATTGGGTAACCTTCAGTAGCAACGGTTCTTCTGTAACTTTCGAAGTTCCTCAAGTGGATGGGTGTTCTTTGAAGACAATCATGTGCATTGCCTATTCTTCTTCTTCTTCTTCCCCAGACAATACAACAACAGAAGGTTTTAAAGTTGTATTATTGATAAATTGCACAAAGAACACCATTCAGGTGTACAAGATAGGTGCATTATTAGCATCTTTTGACGAGGATGAGTGGCAGAGAGTAATATCAAGTATAGAACCTGGCAACGAAATTAAGGTGGTGGTTGTTTTTTCAAATGAATTCATTGTGAAGAAAACAACAATTTATCTTGTATATGATGAACCAATTGAGATTAAAAAGACTAATAATCATTGCCATGATCCAAATGAAAATATATTTGGTAGACTCTTCTTCGCCATTCCTTCCCTTGCTCGAGCTGTTATGATTTCACGGCCTTTCTGGTTCTGTTTGGCTGGTATTATGGTTTGGTCGTTATCTCATCGCCGTTCTGAAAAACGAAGAAGAGGCAACCAACCTATTCTAAGGGAAGTTAGTGGCATCCACGAGCTCTCTTTAGACAAAAAACCCTTTGGTTGA 4761 0.3804 MSVRVPLHGWNYDYDVFLSYHDKALCKPFAAALYSALTQAGLVVYINHNNLPTGDQTNFSAIEASRTCIIIFSSSFDASKWFLEELEKILDCRANIGQVVVPVYYNVQDYHVRSQKESFGKAKSMRYRAALSGVSNMLGFLPWNFRDEREGINNIVHDLTRFIEDKFFFVDKHLVGLEARLQDVIQLLSKKQSQDTIILGIWGINGIGKTIIAKAIYNQMGSSFKGQCFLHLNVNKYFQHRNDQVSLQRQLLSNIYKTTEIQIDTVESGKMVLHKSLHRTKIFLVLDNVNNLEQLNALCGSREWFGRGSRIIITTRDRDILRKFEVDHTYRIKYMNSTESLELFNRHAFKTLRPIESYTDLCRDVVEYCGGFPLALEEIGSSLFGRSVAEWQIVLEKLKTNGNHVVMEKLRIGFDDLQHEEKEIFLKIATLFIGMDKDDVIQTLNYAGHQPDIGLRVLVDKSLVTIDSKNRIGMHTLVRAMGGEITRQRSRGMAETKMYDVFLSFRGEDSRAKFISHVHSSLQSSGIYVFKDEDGIQRGDQITVSLLQAIGQSKIAIVVLSRNYANSKWCLLELERIVEMGRTNGTLVLPVFYEVDPSEVRYQTGEIGKAFEYLISTISVDEYTKRKWKTALQEVGGRAGVVIINSRNESEDIKKIVELVTRLLDKTELFVADHPVGVESRVQDVIQLLNSQKSKDPLLLGIWGMGGIGKTTLAKAVYNKIRHDFDGKSFLFNVREVWKLDNDKVSLQQRLLSDIYKTTKIKIDTVESGKMILQKRLCEKRIFLVIDDVNHLDQLNALCGNRKWFGEGSRIIITTRDDDLLSRLEVDHVYRMKEMDDNESLELFNWHAFKQPIPSKGFTNLSRDVVKYSGGLPLALQVIGSFLLTRKRETEWNSVLEKLKLIPNDEVSEKLRISFDGLIDDDMKDIFLDIAFFFIGMDRQDVTEILKDCGHFPEIGISVLVQQSLVTVDRKNKIGMHDLLRDMGREIIRKKSKEGGKEPSRLWRYEDVLELPKDTSTLDVKGLTLKMSRMDSTTYLETKAFEKMDKLRLFQLSGVQLDGDYKYLPRHLRWLSWHGFPLKCTPSDFHQQSLVAVEFKYSKLERVWRKSQLLVKLKILNLSHSHNLRHTPNFSNLPNLEKLILKDCPSLSSVSSNIGQLKKILLINLKDCTGLHELPRSIYKLDSLKTLILSGCTKIDKLEEDIEQMISLTTLVADNTAIAKVPFAVVRSKSIAYISLCGYEGFARKVFPSIIQSWLSPTNSILSLVQTFAGTSCLDITDEQNNSFYCLSSIFEDLQNLQRLWLKCDSEAQLNQTVASILDSSNTRNCEGFSTSASIHSHSQVCMSSSKNSLTSFLIQMGVSCNVANILRESILQKMPPIGTGFLPGDNYPNWVTFSSNGSSVTFEVPQVDGCSLKTIMCIAYSSSSSSPDNTTTEGFKVVLLINCTKNTIQVYKIGALLASFDEDEWQRVISSIEPGNEIKVVVVFSNEFIVKKTTIYLVYDEPIEIKKTNNHCHDPNENIFGRLFFAIPSLARAVMISRPFWFCLAGIMVWSLSHRRSEKRRRGNQPILREVSGIHELSLDKKPFG* 1587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4499 1586 Gene3D - 9 165 IPR035897 -
Tpr4g4499 1586 Gene3D - 493 671 IPR035897 -
Tpr4g4499 1586 Gene3D - 834 919 IPR042197 -
Tpr4g4499 1586 Gene3D - 334 418 IPR042197 -
Tpr4g4499 1586 SMART AAA_5 195 333 IPR003593 -
Tpr4g4499 1586 SMART AAA_5 696 839 IPR003593 -
Tpr4g4499 1586 Pfam NB-ARC domain 679 900 IPR002182 GO:0043531
Tpr4g4499 1586 Pfam NB-ARC domain 178 404 IPR002182 GO:0043531
Tpr4g4499 1586 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 662 930 IPR027417 -
Tpr4g4499 1586 Pfam TIR domain 499 660 IPR000157 GO:0007165
Tpr4g4499 1586 Pfam TIR domain 14 122 IPR000157 GO:0007165
Tpr4g4499 1586 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 507 1500 - -
Tpr4g4499 1586 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 26 492 - -
Tpr4g4499 1586 SUPERFAMILY Toll/Interleukin receptor TIR domain 493 640 IPR035897 -
Tpr4g4499 1586 ProSiteProfiles TIR domain profile. 497 664 IPR000157 GO:0007165
Tpr4g4499 1586 SMART till_3 13 137 IPR000157 GO:0007165
Tpr4g4499 1586 SMART till_3 498 638 IPR000157 GO:0007165
Tpr4g4499 1586 Gene3D - 672 830 IPR027417 -
Tpr4g4499 1586 CDD AAA 676 828 - -
Tpr4g4499 1586 ProSiteProfiles TIR domain profile. 12 163 IPR000157 GO:0007165
Tpr4g4499 1586 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 427 IPR027417 -
Tpr4g4499 1586 Gene3D Ribonuclease Inhibitor 1015 1240 IPR032675 -
Tpr4g4499 1586 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 492 IPR044974 GO:0006952
Tpr4g4499 1586 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 507 1500 IPR044974 GO:0006952
Tpr4g4499 1586 SUPERFAMILY "Winged helix" DNA-binding domain 407 491 IPR036390 -
Tpr4g4499 1586 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 127 IPR035897 -
Tpr4g4499 1586 Gene3D - 166 329 IPR027417 -
Tpr4g4499 1586 PRINTS Disease resistance protein signature 699 714 - -
Tpr4g4499 1586 PRINTS Disease resistance protein signature 776 790 - -
Tpr4g4499 1586 PRINTS Disease resistance protein signature 869 883 - -
Tpr4g4499 1586 PRINTS Disease resistance protein signature 1179 1195 - -
Tpr4g4499 1586 SUPERFAMILY L domain-like 976 1303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4499 Tpr-Chr4 52970387 52977684 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4499 6 490 WRKY Transcription Factor Family AT4G12020 28.138 6.31e-46 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4499 - - mtr:MTR_7g088950 1843.17